RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 TNNC1P63316 161 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 ADCY1Q08828 1119 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 INTS6LQ5JSJ4 861 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 PPM1LQ5SGD2 360 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 LRRTM3Q86VH5 581 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 IRF2BP1Q8IU81 584 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 DCP1BQ8IZD4 617 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 FBXL13Q8NEE6 735 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 SMG7Q92540 1137 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 SRRTQ9BXP5 876 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 BCO2Q9BYV7 579 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 POMKQ9H5K3 350 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 FAM124BQ9H5Z6 455 aaPredicted RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 WDR6Q9NNW5 1121 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 DDX43Q9NXZ2 648 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 TMEM63CQ9P1W3 806 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 CDH22Q9UJ99 828 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 INSL5Q9Y5Q6 135 aa15.38■□□□□ 0.05
COL3A1-203ENST00000450867 ZNF638Q14966 1978 aaKnown RBP15.38■□□□□ 0.05
COL3A1-203ENST00000450867 SPDYE4A6NLX3 237 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 LOC730098B7Z3J9 87 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 P4HA2O15460 535 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 XYLBO75191 536 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 P4HA1P13674 534 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 ELF1P32519 619 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 ASPAP45381 313 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 TSPY1Q01534 308 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 NFE2Q16621 373 aaPredicted RBP15.37■□□□□ 0.05
COL3A1-203ENST00000450867 KLHL40Q2TBA0 621 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 CCDC40Q4G0X9 1142 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 CBWD6Q4V339 395 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 CBWD3Q5JTY5 395 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 CBWD5Q5RIA9 395 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 FAM171BQ6P995 826 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 SPPL2BQ8TCT7 592 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 MMS19Q96T76 1030 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 APOL5Q9BWW9 433 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 CRISPLD1Q9H336 500 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 CYP4F11Q9HBI6 524 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 ABCB6Q9NP58 842 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 AVENQ9NQS1 362 aaPredicted RBP15.37■□□□□ 0.05
COL3A1-203ENST00000450867 CDH9Q9ULB4 789 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 USTQ9Y2C2 406 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 NME7Q9Y5B8 376 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 PATJQ8NI35 1801 aa15.37■□□□□ 0.05
COL3A1-203ENST00000450867 MYH10P35580 1976 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 PRRG1O14668 218 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 N4BP1O75113 896 aaKnown RBP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 CCDC192P0DO97 292 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 FMO5P49326 533 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 NOP14P78316 857 aaKnown RBP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 INCA1Q0VD86 236 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 SLC39A12Q504Y0 691 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 DCAF17Q5H9S7 520 aaPredicted RBP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 TCERG1LQ5VWI1 586 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 SEMA4DQ92854 862 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 FUBP3Q96I24 572 aaKnown RBP eCLIP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 UHRF1Q96T88 793 aaPredicted RBP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 MRPL45Q9BRJ2 306 aaKnown RBP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 IMPG2Q9BZV3 1241 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 NIF3L1Q9GZT8 377 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 THAP9Q9H5L6 903 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 SMYD3Q9H7B4 428 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 APOBEC3GQ9HC16 384 aaKnown RBP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 TMLHEQ9NVH6 421 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 RAB20Q9NX57 234 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 NXF1Q9UBU9 619 aaKnown RBP15.36■□□□□ 0.05
COL3A1-203ENST00000450867 POLIQ9UNA4 740 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 YIPF1Q9Y548 306 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 CLUHO75153 1309 aa15.36■□□□□ 0.05
COL3A1-203ENST00000450867 WEE2P0C1S8 567 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 LMO2P25791 158 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 GNL1P36915 607 aaPredicted RBP15.35■□□□□ 0.05
COL3A1-203ENST00000450867 TUFMP49411 452 aaKnown RBP15.35■□□□□ 0.05
COL3A1-203ENST00000450867 EPHA5P54756 1037 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 DUSP4Q13115 394 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 PLD1Q13393 1074 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 MAPRE1Q15691 268 aaKnown RBP15.35■□□□□ 0.05
COL3A1-203ENST00000450867 CFAP221Q4G0U5 840 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 ATAD1Q8NBU5 361 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 CNOT6LQ96LI5 555 aaKnown RBP15.35■□□□□ 0.05
COL3A1-203ENST00000450867 SYT15Q9BQS2 421 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 COL25A1Q9BXS0 654 aaPredicted RBP15.35■□□□□ 0.05
COL3A1-203ENST00000450867 SDCBP2Q9H190 292 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 CYP3A43Q9HB55 503 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 CRTAC1Q9NQ79 661 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 ANO10Q9NW15 660 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 PCDHB5Q9Y5E4 795 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 TRIOO75962 3097 aa15.35■□□□□ 0.05
COL3A1-203ENST00000450867 NUP210Q8TEM1 1887 aaPredicted RBP15.34■□□□□ 0.05
COL3A1-203ENST00000450867 CCL16O15467 120 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 HCRTO43612 131 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 LRRN2O75325 713 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 LRG1P02750 347 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 HAPLN1P10915 354 aaPredicted RBP15.34■□□□□ 0.05
COL3A1-203ENST00000450867 ACAT1P24752 427 aaKnown RBP15.34■□□□□ 0.05
COL3A1-203ENST00000450867 MAGEA11P43364 429 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 STX1AQ16623 288 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 SPOPLQ6IQ16 392 aa15.34■□□□□ 0.05
COL3A1-203ENST00000450867 SASS6Q6UVJ0 657 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms