RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 RIN2Q8WYP3 895 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 C8orf48Q96LL4 319 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 FAM227BQ96M60 508 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZNF570Q96NI8 536 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ERGIC2Q96RQ1 377 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PSTPIP2Q9H939 334 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CCNB1IP1Q9NPC3 277 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KLHL1Q9NR64 748 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TLR7Q9NYK1 1049 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 SUCOQ9UBS9 1254 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 SERPINB13Q9UIV8 391 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PTBP2Q9UKA9 531 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 NUP50Q9UKX7 468 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TECPR2O15040 1411 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PRR23D1E9PI22 279 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 H0YCG3 227 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SNAP23O00161 211 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KCNK1O00180 336 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TNFRSF10AO00220 468 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GRM8O00222 908 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PIK3R2O00459 728 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SNPHO15079 494 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NCAM2O15394 837 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TIMM44O43615 452 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NBNO60934 754 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 COBLO75128 1261 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TGM6O95932 706 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CD4P01730 458 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 YES1P07947 543 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ABCB1P08183 1280 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PRR23D2P0DMB1 279 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 RARAP10276 462 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 P4HA1P13674 534 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 IL4RP24394 825 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GP5P40197 560 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MMP13P45452 471 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SLCO1A2P46721 670 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ALDH1A3P47895 512 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ETV1P50549 477 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC12A2P55011 1212 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NAA20P61599 178 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 YWHAGP61981 247 aaKnown RBP eCLIP2.3□□□□□ -2.04
USP53-202ENST00000450251 CCDC58Q4VC31 144 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 COBLL1Q53SF7 1204 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TNFAIP8L3Q5GJ75 292 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 AARS2Q5JTZ9 985 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 RNF220Q5VTB9 566 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BICRALQ6AI39 1079 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 MFSD5Q6N075 450 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TAF2Q6P1X5 1199 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 C6orf89Q6UWU4 347 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CLEC4GQ6UXB4 293 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KSR2Q6VAB6 950 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CYP4V2Q6ZWL3 525 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 EFL1Q7Z2Z2 1120 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PIGWQ7Z7B1 504 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 C12orf56Q8IXR9 622 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PJA1Q8NG27 643 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 LINS1Q8NG48 757 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 DEPDC1BQ8WUY9 529 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 STARD8Q92502 1023 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 USP13Q92995 863 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 TAMM41Q96BW9 452 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ARL5BQ96KC2 179 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CEP170P1Q96L14 293 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CLIC6Q96NY7 704 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 YME1L1Q96TA2 773 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 THTPAQ9BU02 230 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PHF20Q9BVI0 1012 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KIFC1Q9BW19 673 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TEKT3Q9BXF9 490 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PUS3Q9BZE2 481 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ASPSCR1Q9BZE9 553 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GRIP2Q9C0E4 1043 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CLPBQ9H078 707 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC12A5Q9H2X9 1139 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 RUBCNLQ9H714 662 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TCF7L2Q9NQB0 619 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 DDX18Q9NVP1 670 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC39A1Q9NY26 324 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NPAP1Q9NZP6 1156 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 IPO11Q9UI26 975 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 PLCL2Q9UPR0 1127 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 KIDINS220Q9ULH0 1771 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZMYM2Q9UBW7 1377 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 A0A1W2PQ72 361 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CCDC182A6NF36 153 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 H0YJX3 145 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 GOLGA8SH3BPF8 625 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 C2CD2LO14523 706 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZBTB39O15060 712 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SLC22A2O15244 555 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 LZTS3O60299 673 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 GYPCP04921 128 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PABPC4LP0CB38 370 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 ATP6V1B1P15313 513 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 M6PRP20645 277 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PMLP29590 882 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PMS1P54277 932 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 FKBP3Q00688 224 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms