RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NR2F2P24468 414 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 HIRAP54198 1017 aaPredicted RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 VCPP55072 806 aaKnown RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 HADHBP55084 474 aaKnown RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 BTKQ06187 659 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 PTK6Q13882 451 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 C16orf72Q14CZ0 275 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 EPHA7Q15375 998 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 TGFBIQ15582 683 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 KCTD21Q4G0X4 260 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 CRTC2Q53ET0 693 aaPredicted RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 DCAF17Q5H9S7 520 aaPredicted RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 HEATR3Q7Z4Q2 680 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 DGKHQ86XP1 1220 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 TDRPQ86YL5 185 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ZC3H3Q8IXZ2 948 aaKnown RBP9.06□□□□□ -0.96
LSM5-208ENST00000450169 CGREF1Q99674 301 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 NMUR2Q9GZQ4 415 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 KCTD10Q9H3F6 313 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 KCNK13Q9HB14 408 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 GCNT4Q9P109 453 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 ADAMTS6Q9UKP5 1117 aa9.06□□□□□ -0.96
LSM5-208ENST00000450169 POC1B-GALNT4F8VUJ3 575 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 TNFAIP8O95379 198 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 ENO1P06733 434 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 COMTP21964 271 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 S100A1P23297 94 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 ADRA1DP25100 572 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 PMLP29590 882 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 SOX5P35711 763 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 ADCY8P40145 1251 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 CLCN2P51788 898 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 NCKAP1LP55160 1127 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 NOP14P78316 857 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 TLR1Q15399 786 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 TRIP10Q15642 601 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 TRIP13Q15645 432 aaPredicted RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 SEPT7Q16181 437 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 ZNF423Q2M1K9 1284 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 EDRF1Q3B7T1 1238 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 SGO2Q562F6 1265 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 PCNX4Q63HM2 1172 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 NEPROQ6NW34 567 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 DHRS4L2Q6PKH6 230 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 ISLR2Q6UXK2 745 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 KYAT3Q6YP21 454 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 RNF111Q6ZNA4 994 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 SYDE1Q6ZW31 735 aaPredicted RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 FRMD5Q7Z6J6 570 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 RELL1Q8IUW5 271 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 DDI1Q8WTU0 396 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 C1orf54Q8WWF1 131 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 RAPGEF4Q8WZA2 1011 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 DNAJC19Q96DA6 116 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 CFAP57Q96MR6 1250 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 BIRC8Q96P09 236 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 TSSK1BQ9BXA7 367 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 C17orf75Q9HAS0 396 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 SEPT11Q9NVA2 429 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 TAS2R14Q9NYV8 317 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 COQ6Q9Y2Z9 468 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 GPC6Q9Y625 555 aaPredicted RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 CYP2D7A0A087X1C5 515 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 C2orf71A6NGG8 1288 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 H3BSA7 217 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 EIF3FO00303 357 aaPredicted RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 ADCY6O43306 1168 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 DLDP09622 509 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 FDFT1P37268 417 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 STT3AP46977 705 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 ENTPD1P49961 510 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 NR1H2P55055 460 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 NONOQ15233 471 aaKnown RBP eCLIP9.05□□□□□ -0.96
LSM5-208ENST00000450169 DLGAP5Q15398 846 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 SMUG1Q53HV7 270 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 EFHC1Q5JVL4 640 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 KRT25Q7Z3Z0 450 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 KCNK18Q7Z418 384 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 NEK8Q86SG6 692 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 GSTCDQ8NEC7 633 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 PYROXD1Q8WU10 500 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 SCFD1Q8WVM8 642 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 ATP6V0A1Q93050 837 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 GCNAQ96QF7 691 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 RBM15Q96T37 977 aaKnown RBP eCLIP9.05□□□□□ -0.96
LSM5-208ENST00000450169 HEPHQ9BQS7 1158 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 CRNKL1Q9BZJ0 848 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 DRC3Q9H069 523 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 WNT8AQ9H1J5 351 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 Q9H521 79 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 ZNF696Q9H7X3 374 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 MANSC1Q9H8J5 431 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 RRN3Q9NYV6 651 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 RSL24D1Q9UHA3 163 aaKnown RBP9.05□□□□□ -0.96
LSM5-208ENST00000450169 CEPT1Q9Y6K0 416 aa9.05□□□□□ -0.96
LSM5-208ENST00000450169 NHSL1Q5SYE7 1610 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 USP17L3A6NCW0 530 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 USP17L4A6NCW7 530 aa9.04□□□□□ -0.96
LSM5-208ENST00000450169 CAPN14A8MX76 684 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms