RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 RTP2Q5QGT7 225 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 CBWD5Q5RIA9 395 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 THEM5Q8N1Q8 247 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 EHBP1Q8NDI1 1231 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 CMASQ8NFW8 434 aaPredicted RBP9.84□□□□□ -0.83
RFX3-207ENST00000449190 TAS1R2Q8TE23 839 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 FAM84AQ96KN4 292 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 SUSD3Q96L08 255 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 SENP8Q96LD8 212 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 PCMTD1Q96MG8 357 aaPredicted RBP9.84□□□□□ -0.83
RFX3-207ENST00000449190 APOL5Q9BWW9 433 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 PLEKHA4Q9H4M7 779 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 GDAP2Q9NXN4 497 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 NXF1Q9UBU9 619 aaKnown RBP9.84□□□□□ -0.83
RFX3-207ENST00000449190 SIX4Q9UIU6 781 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 SNX9Q9Y5X1 595 aa9.84□□□□□ -0.83
RFX3-207ENST00000449190 LRRC10BA6NIK2 292 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 I3L4J1 428 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 PPEF2O14830 753 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 PAPLNO95428 1278 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 VNN1O95497 513 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 TPM3P06753 285 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 FAM163BP0C2L3 166 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 ALADP13716 330 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 ZNF18P17022 549 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 TRIM21P19474 475 aaKnown RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 IGFBP6P24592 240 aaPredicted RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 COPB1P53618 953 aaKnown RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 PSMD5Q16401 504 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 EXOC3L4Q17RC7 722 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 RARS2Q5T160 578 aaKnown RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 PRSS55Q6UWB4 352 aaPredicted RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 C15orf39Q6ZRI6 1047 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 ANKS3Q6ZW76 656 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 DPH6Q7L8W6 267 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 GPR149Q86SP6 731 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 PALB2Q86YC2 1186 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 TMEM86AQ8N2M4 240 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 TOP6BLQ8N6T0 577 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 C12orf76Q8N812 135 aaPredicted RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 RNF214Q8ND24 703 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 C3orf58Q8NDZ4 430 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 FAXDC2Q96IV6 333 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 B3GALT6Q96L58 329 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 FAM81BQ96LP2 452 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 CLSTN3Q9BQT9 956 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 C1QTNF1Q9BXJ1 281 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 OXCT2Q9BYC2 517 aaPredicted RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 RHOBTB2Q9BYZ6 727 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 INTS2Q9H0H0 1204 aaKnown RBP9.83□□□□□ -0.84
RFX3-207ENST00000449190 SNX25Q9H3E2 840 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 SFXN1Q9H9B4 322 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 COQ4Q9Y3A0 265 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 BACE2Q9Y5Z0 518 aa9.83□□□□□ -0.84
RFX3-207ENST00000449190 ATG2AQ2TAZ0 1938 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 CDH23Q9H251 3354 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 CCDC195A0A1B0GUA6 201 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 GTPBP10A4D1E9 387 aaKnown RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 M0QZQ0 153 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 SPTLC1O15269 473 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 CBFA2T2O43439 604 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 TGM5O43548 720 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 ASS1P00966 412 aaKnown RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 RPL17P18621 184 aaKnown RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 TYMPP19971 482 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 TKTP29401 623 aaKnown RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 LHX1P48742 406 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 AARSP49588 968 aaKnown RBP eCLIP9.82□□□□□ -0.84
RFX3-207ENST00000449190 YWHAEP62258 255 aaKnown RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 FANCCQ00597 558 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 UBXN1Q04323 297 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 YWHAHQ04917 246 aaPredicted RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 LRMPQ12912 555 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 RAB33AQ14088 237 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 MRPL58Q14197 206 aaKnown RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 UVSSAQ2YD98 709 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 OVOS1Q6IE37 1185 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 RTL10Q7L3V2 364 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 TMEM130Q8N3G9 435 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 TTC39CQ8N584 583 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 KREMEN2Q8NCW0 462 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 CXorf38Q8TB03 319 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 RPGRIP1Q96KN7 1286 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 NT5C1BQ96P26 610 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 CRACR2AQ9BSW2 395 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 PI4K2AQ9BTU6 479 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 NIF3L1Q9GZT8 377 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 EPHX3Q9H6B9 360 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 VRTNQ9H8Y1 702 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 CYP3A43Q9HB55 503 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.82□□□□□ -0.846e-6■■■■■ 48.1
RFX3-207ENST00000449190 MAN1C1Q9NR34 630 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 ZDHHC7Q9NXF8 308 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 GCNT4Q9P109 453 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 MTRRQ9UBK8 725 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 NR2E1Q9Y466 385 aa9.82□□□□□ -0.84
RFX3-207ENST00000449190 TDRD15B5MCY1 1934 aaKnown RBP9.82□□□□□ -0.84
RFX3-207ENST00000449190 LGALS16A8MUM7 142 aa9.81□□□□□ -0.84
RFX3-207ENST00000449190 TBC1D4O60343 1298 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms