RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 LEMD2Q8NC56 503 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 RNF217Q8TC41 542 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 CDCA3Q99618 268 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SYT15Q9BQS2 421 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM207AQ9NSI2 230 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 TIMM13Q9Y5L4 95 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZSCAN12O43309 604 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 FGF18O76093 207 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SNAI1O95863 264 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ANTXR2P58335 489 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF200P98182 395 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 KIF5AQ12840 1032 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZNF177Q13360 481 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 GDF6Q6KF10 455 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 PDCL2Q8N4E4 241 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 DAGLBQ8NCG7 672 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ST13P5Q8NFI4 369 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 IQCDQ96DY2 449 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ASB7Q9H672 318 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SFXN1Q9H9B4 322 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 TLR8Q9NR97 1041 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 DUS2Q9NX74 493 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 OGDHLQ9ULD0 1010 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 INPPL1O15357 1258 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 KIF5CO60282 957 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 LMNAP02545 664 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ICAM3P32942 547 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 BMPR1AP36894 532 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SNW1Q13573 536 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 NCOA4Q13772 614 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 KRBA2Q6ZNG9 492 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 MAB21L3Q8N8X9 362 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 FOPNLQ96NB1 174 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 R3HDMLQ9H3Y0 253 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 FOXD2O60548 495 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 CASP14P31944 242 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 NOVA1P51513 510 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 HSD17B4P51659 736 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 VAMP7P51809 220 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 TWF1Q12792 350 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 KNOP1Q1ED39 458 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SFMBT2Q5VUG0 894 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 FUT10Q6P4F1 479 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 MAMDC4Q6UXC1 1216 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCDC91Q7Z6B0 441 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 CCDC33Q8N5R6 958 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 AOPEPQ8N6M6 819 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 FBXL13Q8NEE6 735 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 PDZD8Q8NEN9 1154 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 MED15Q96RN5 788 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 UBE2TQ9NPD8 197 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 ADAM28Q9UKQ2 775 aa5.94□□□□□ -1.46
CDC42BPA-209ENST00000448940 TEX33O43247 280 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 DYRK3O43781 588 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 S100BP04271 92 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 USP17L7P0C7H9 530 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 YWHAQP27348 245 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ERCC5P28715 1186 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 TIE1P35590 1138 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 OXCT1P55809 520 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 KRT83P78385 493 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 EXOSC10Q01780 885 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 KDSRQ06136 332 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMTC4Q5T4D3 741 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 TRIML1Q8N9V2 468 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 IL31RAQ8NI17 732 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 PLEKHA4Q9H4M7 779 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 GPRC5CQ9NQ84 441 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 RAD18Q9NS91 495 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SAMSN1Q9NSI8 373 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 DEC1Q9P2X7 70 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ANGPTL3Q9Y5C1 460 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM170AA1A519 330 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 MYO1FO00160 1098 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 EXTL3O43909 919 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 LRRN2O75325 713 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 CYP3A4P08684 503 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 PMLP29590 882 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ATP1A2P50993 1020 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 LRRC26Q2I0M4 334 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 MAP9Q49MG5 647 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 ZPBP2Q6X784 338 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 TMC6Q7Z403 805 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 PTAR1Q7Z6K3 402 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 C11orf74Q86VG3 221 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM129CQ86XR2 697 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SLC7A14Q8TBB6 771 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 P2RX5Q93086 422 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 FAM49BQ9NUQ9 324 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 CDY1Q9Y6F8 540 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 C1QTNF3-AMACRE9PGA6 284 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 B4GALT4O60513 344 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 MLYCDO95822 493 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SOX5P35711 763 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 NPTX2P47972 431 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 MAPK10P53779 464 aa5.93□□□□□ -1.46
CDC42BPA-209ENST00000448940 SNRPFP62306 86 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms