RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 ARID1BQ8NFD5 2236 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 GAS2O43903 313 aaKnown RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 KATNA1O75449 491 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 OR6B1O95007 311 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 UBTFL6P0CB48 400 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 FAM200BP0CF97 657 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 AP3S2P59780 193 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 SRP54P61011 504 aaKnown RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 KYNUQ16719 465 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PAGR1Q9BTK6 254 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 CD274Q9NZQ7 290 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ALG11Q2TAA5 492 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 STK33Q9BYT3 514 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF408Q9H9D4 720 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 GPN1Q9HCN4 374 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 CD3EAPO15446 510 aaKnown RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 RIPPLY1Q0D2K3 151 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 QPRTQ15274 297 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 TAF13Q15543 124 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 FAM83EQ2M2I3 478 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 GRHL2Q6ISB3 625 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 C4orf22Q6V702 233 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 TMC4Q7Z404 712 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 GIMAP8Q8ND71 665 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 GRPEL2Q8TAA5 225 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 C12orf66Q96MD2 445 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 TRABDQ9H4I3 376 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 JMJD4Q9H9V9 463 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PIDD1Q9HB75 910 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ENTPD7Q9NQZ7 604 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 GRID1Q9ULK0 1009 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 POLIQ9UNA4 740 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PLCL2Q9UPR0 1127 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 A0A1W2PQ27 194 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 A0A1W2PQ64 194 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 A0A1W2PQD8 194 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 EIF4A3P38919 411 aaKnown RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 RBL2Q08999 1139 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 C20orf194Q5TEA3 1177 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ENOSF1Q7L5Y1 443 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PEX5LQ8IYB4 626 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 CCDC54Q8NEL0 328 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 SMAD5Q99717 465 aaKnown RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 TEX13BQ9BXU2 312 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 SYNDIG1Q9H7V2 258 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 KNTC1P50748 2209 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 GPC1P35052 558 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 SPRP35270 261 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 KIZQ2M2Z5 673 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ARHGEF19Q8IW93 802 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PGBD4Q96DM1 585 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 FAM213AQ9BRX8 229 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 COMMD8Q9NX08 183 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 ARHGEF38Q9NXL2 777 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 MCM8Q9UJA3 840 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 RCOR1Q9UKL0 485 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 PRELID1Q9Y255 219 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 CARD8Q9Y2G2 431 aa9.29□□□□□ -0.92
NIPBL-202ENST00000448238 EPB42P16452 691 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 POU4F1Q01851 419 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 CDH18Q13634 790 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 KCTD2Q14681 263 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 AFG1LQ8WV93 481 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 MYLPFQ96A32 169 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 PDE4DIPQ5VU43 2346 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 RIMBP2O15034 1052 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 ARPC4P59998 168 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 CYP24A1Q07973 514 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 STOX1Q6ZVD7 989 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 SLC13A5Q86YT5 568 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 RHOT1Q8IXI2 618 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 YAF2Q8IY57 180 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 ZNF577Q9BSK1 485 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 DSCC1Q9BVC3 393 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 DSEQ9UL01 958 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 EIF4E1BA6NMX2 242 aaKnown RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 hCG_1984214I3L0E3 225 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 APOL1O14791 398 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 SEMA3EO15041 775 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 SOAT2O75908 522 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 ASMTLO95671 621 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 TSPAN19P0C672 248 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 AGR3Q8TD06 166 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 C17orf50Q8WW18 174 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 KLHL32Q96NJ5 620 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 PRMT1Q99873 361 aaKnown RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 RHOBTB2Q9BYZ6 727 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 FOXP1Q9H334 677 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 PSMC3IPQ9P2W1 217 aaPredicted RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 ZMYM6O95789 1325 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 CYP2D7A0A087X1C5 515 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 FKBP6O75344 327 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 LBPP18428 481 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 EIF5AP63241 154 aaKnown RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 CYFIP1Q7L576 1253 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 NCOA5Q9HCD5 579 aaKnown RBP9.28□□□□□ -0.92
NIPBL-202ENST00000448238 STARD13Q9Y3M8 1113 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 PGK1P00558 417 aa9.28□□□□□ -0.92
NIPBL-202ENST00000448238 VCLP18206 1134 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms