RNA–Protein interactions for RNA: ENST00000448192.1

DDX56-207, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-207ENST00000448192 SPPL2BQ8TCT7 592 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 C2orf15Q8WU43 125 aaKnown RBP19.04■□□□□ 0.64
DDX56-207ENST00000448192 LEO1Q8WVC0 666 aaPredicted RBP19.04■□□□□ 0.64
DDX56-207ENST00000448192 LPIN3Q9BQK8 851 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 TRMT61BQ9BVS5 477 aaKnown RBP19.04■□□□□ 0.64
DDX56-207ENST00000448192 GPR88Q9GZN0 384 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 BRD9Q9H8M2 597 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 ZNF334Q9HCZ1 680 aaPredicted RBP19.04■□□□□ 0.64
DDX56-207ENST00000448192 ZDHHC9Q9Y397 364 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 SNX9Q9Y5X1 595 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 CACNA1HO95180 2353 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 TICRRQ7Z2Z1 1910 aa19.04■□□□□ 0.64
DDX56-207ENST00000448192 A0A1B0GVL5 298 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 KANSL1LA0AUZ9 987 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 ACTN4O43707 911 aaKnown RBP19.03■□□□□ 0.64
DDX56-207ENST00000448192 PFKFB1P16118 471 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 ATF6P18850 670 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 CD72P21854 359 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 GABRR2P28476 465 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 KRT85P78386 507 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 SMARCB1Q12824 385 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 MYO1EQ12965 1108 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 UBXN2BQ14CS0 331 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 VEPH1Q14D04 833 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 TAF12Q16514 161 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 SNRNP35Q16560 246 aaKnown RBP19.03■□□□□ 0.64
DDX56-207ENST00000448192 DUOXA2Q1HG44 320 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 VITQ6UXI7 678 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 GIPC2Q8TF65 315 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 ATXN3LQ9H3M9 355 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 GDAP2Q9NXN4 497 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 DDX43Q9NXZ2 648 aaKnown RBP19.03■□□□□ 0.64
DDX56-207ENST00000448192 PCDHB5Q9Y5E4 795 aa19.03■□□□□ 0.64
DDX56-207ENST00000448192 LRRN2O75325 713 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 FGF19O95750 216 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 DLATP10515 647 aaKnown RBP19.02■□□□□ 0.64
DDX56-207ENST00000448192 HAPLN1P10915 354 aaPredicted RBP19.02■□□□□ 0.64
DDX56-207ENST00000448192 PSMC3P17980 439 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 CMA1P23946 247 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 ACAT1P24752 427 aaKnown RBP19.02■□□□□ 0.64
DDX56-207ENST00000448192 GDI1P31150 447 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 MYL7Q01449 175 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 STXBP5Q5T5C0 1151 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 TPRG1Q6ZUI0 275 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 GAREM2Q75VX8 874 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 GPIHBP1Q8IV16 184 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 WDR49Q8IV35 697 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 TMEM86AQ8N2M4 240 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 XXYLT1Q8NBI6 393 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 CCDC127Q96BQ5 260 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 PAGE5Q96GU1 130 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 HPDLQ96IR7 371 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 DDX23Q9BUQ8 820 aaKnown RBP19.02■□□□□ 0.64
DDX56-207ENST00000448192 HEBP1Q9NRV9 189 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 TMLHEQ9NVH6 421 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 NUP210Q8TEM1 1887 aaPredicted RBP19.02■□□□□ 0.64
DDX56-207ENST00000448192 DMDP11532 3685 aa19.02■□□□□ 0.64
DDX56-207ENST00000448192 TNNI1P19237 187 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 SNRPFP62306 86 aaKnown RBP19.01■□□□□ 0.63
DDX56-207ENST00000448192 NFE2Q16621 373 aaPredicted RBP19.01■□□□□ 0.63
DDX56-207ENST00000448192 BMT2Q1RMZ1 405 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 ARHGAP15Q53QZ3 475 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 ADGRF2Q8IZF7 708 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 TOP6BLQ8N6T0 577 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 FNBP1Q96RU3 617 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 ACBD6Q9BR61 282 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 PI4K2AQ9BTU6 479 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 TRPV4Q9HBA0 871 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 EXOC1Q9NV70 894 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 DLGAP2Q9P1A6 1054 aa19.01■□□□□ 0.63
DDX56-207ENST00000448192 MTF2Q9Y483 593 aaPredicted RBP19.01■□□□□ 0.63
DDX56-207ENST00000448192 DENND4CQ5VZ89 1909 aa19■□□□□ 0.63
DDX56-207ENST00000448192 FAM170BA6NMN3 283 aa19■□□□□ 0.63
DDX56-207ENST00000448192 HEPACAM2A8MVW5 462 aa19■□□□□ 0.63
DDX56-207ENST00000448192 KLRC4O43908 158 aa19■□□□□ 0.63
DDX56-207ENST00000448192 GFRA3O60609 400 aa19■□□□□ 0.63
DDX56-207ENST00000448192 PRPF40AO75400 957 aaKnown RBP19■□□□□ 0.63
DDX56-207ENST00000448192 GLULP15104 373 aa19■□□□□ 0.63
DDX56-207ENST00000448192 LHX1P48742 406 aa19■□□□□ 0.63
DDX56-207ENST00000448192 CYP24A1Q07973 514 aa19■□□□□ 0.63
DDX56-207ENST00000448192 KNOP1Q1ED39 458 aaKnown RBP19■□□□□ 0.63
DDX56-207ENST00000448192 SOWAHAQ2M3V2 549 aa19■□□□□ 0.63
DDX56-207ENST00000448192 GPR158Q5T848 1215 aa19■□□□□ 0.63
DDX56-207ENST00000448192 TRAPPC11Q7Z392 1133 aa19■□□□□ 0.63
DDX56-207ENST00000448192 FRMD5Q7Z6J6 570 aa19■□□□□ 0.63
DDX56-207ENST00000448192 OSTM1Q86WC4 334 aa19■□□□□ 0.63
DDX56-207ENST00000448192 MFSD6LQ8IWD5 586 aa19■□□□□ 0.63
DDX56-207ENST00000448192 YAF2Q8IY57 180 aa19■□□□□ 0.63
DDX56-207ENST00000448192 DEPDC1BQ8WUY9 529 aa19■□□□□ 0.63
DDX56-207ENST00000448192 DNASE1L2Q92874 299 aa19■□□□□ 0.63
DDX56-207ENST00000448192 IRF7Q92985 503 aa19■□□□□ 0.63
DDX56-207ENST00000448192 E2F7Q96AV8 911 aa19■□□□□ 0.63
DDX56-207ENST00000448192 GCNAQ96QF7 691 aa19■□□□□ 0.63
DDX56-207ENST00000448192 LTB4R2Q9NPC1 389 aa19■□□□□ 0.63
DDX56-207ENST00000448192 CGNQ9P2M7 1197 aaKnown RBP19■□□□□ 0.63
DDX56-207ENST00000448192 USP25Q9UHP3 1055 aa19■□□□□ 0.63
DDX56-207ENST00000448192 GTF3C4Q9UKN8 822 aa19■□□□□ 0.63
DDX56-207ENST00000448192 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
DDX56-207ENST00000448192 NCANO14594 1321 aa19■□□□□ 0.63
DDX56-207ENST00000448192 VPS13AQ96RL7 3174 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms