RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 KBTBD12Q3ZCT8 623 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DALRD3Q5D0E6 543 aaKnown RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 LAYNQ6UX15 382 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 B4GALNT2Q8NHY0 566 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 USP33Q8TEY7 942 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 OTULINQ96BN8 352 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 THAP2Q9H0W7 228 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 IL1RAPL1Q9NZN1 696 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DUX4Q9UBX2 424 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DMGDHQ9UI17 866 aaKnown RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 LRRC7Q96NW7 1537 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 EEF2KO00418 725 aaKnown RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NFIBO00712 420 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 PDE5AO76074 875 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NDUFB10O96000 172 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 RPS6P62753 249 aaKnown RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 ACCSLQ4AC99 568 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 SNRNP27Q8WVK2 155 aaKnown RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 FAM162AQ96A26 154 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 TMEM143Q96AN5 459 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 DCUN1D1Q96GG9 259 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 WNK4Q96J92 1243 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 RBBP8Q99708 897 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 ILKAPQ9H0C8 392 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 TMEM245Q9H330 911 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 SLC30A1Q9Y6M5 507 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NRKQ7Z2Y5 1582 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 GPD1P21695 349 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 TMEM132DQ14C87 1099 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 GPAT2Q6NUI2 795 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 RBM43Q6ZSC3 357 aaKnown RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 PLEKHM3Q6ZWE6 761 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 TRIM69Q86WT6 500 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 FAM71DQ8N9W8 422 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 PHF21AQ96BD5 680 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NIF3L1Q9GZT8 377 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 LATS2Q9NRM7 1088 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NYAP2Q9P242 653 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 TAF6LQ9Y6J9 622 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 PRR23D1E9PI22 279 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 POLRMTO00411 1230 aaKnown RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 ZNF263O14978 683 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 ZBTB39O15060 712 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 OCM2P0CE71 109 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 OCMP0CE72 109 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 PRR23D2P0DMB1 279 aaPredicted RBP8.11□□□□□ -1.11
NEDD9-204ENST00000448183 ADRA2BP18089 450 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 PTGER2P43116 358 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 MAP3K7CLP57077 242 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 LRRC74AQ0VAA2 488 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 PTPAQ15257 358 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 BOLA3Q53S33 107 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NAPEPLDQ6IQ20 393 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 ACAD10Q6JQN1 1059 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 EFHBQ8N7U6 833 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 APPL2Q8NEU8 664 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 CNBD2Q96M20 576 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 RIT2Q99578 217 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 NT5C1AQ9BXI3 368 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 SENP2Q9HC62 589 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 SLC39A10Q9ULF5 831 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 AXIN2Q9Y2T1 843 aa8.11□□□□□ -1.11
NEDD9-204ENST00000448183 SETBP1Q9Y6X0 1596 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 H3BQF6 201 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 PRPF4O43172 522 aaKnown RBP eCLIP8.1□□□□□ -1.11
NEDD9-204ENST00000448183 GLRA3O75311 464 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 GRAP2O75791 330 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 THRAP10827 490 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 CPB1P15086 417 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 SMTNL2Q2TAL5 461 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 SCUBE1Q8IWY4 988 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 BBS7Q8IWZ6 715 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 ZNF786Q8N393 782 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 PABPC5Q96DU9 382 aaKnown RBP8.1□□□□□ -1.11
NEDD9-204ENST00000448183 EPB41L4AQ9HCS5 686 aaPredicted RBP8.1□□□□□ -1.11
NEDD9-204ENST00000448183 RHBDL2Q9NX52 303 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 HPS5Q9UPZ3 1129 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 FLT1P17948 1338 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 E2F8A0AVK6 867 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 EVPLLA8MZ36 301 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 PSTPIP1O43586 416 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 PDHBP11177 359 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 GTF2H1P32780 548 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 SOX11P35716 441 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 ACADSBP45954 432 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 KCNMA1Q12791 1236 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 PTK6Q13882 451 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 GJB7Q6PEY0 223 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 GPR141Q7Z602 305 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 TNIP2Q8NFZ5 429 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 FBXO25Q8TCJ0 367 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 ACTRT1Q8TDG2 376 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 PLEKHA8Q96JA3 519 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 SHCBP1LQ9BZQ2 653 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 LACRTQ9GZZ8 138 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 EFCAB1Q9HAE3 211 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 IL1RL2Q9HB29 575 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 WHRNQ9P202 907 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 DUSP10Q9Y6W6 482 aa8.1□□□□□ -1.11
NEDD9-204ENST00000448183 CDC42BPGQ6DT37 1551 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms