RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 RNASELQ05823 741 aaKnown RBP13.6□□□□□ -0.23
SHC1-210ENST00000448116 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
SHC1-210ENST00000448116 GPAT2Q6NUI2 795 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 CENPUQ71F23 418 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 ARHGEF3Q9NR81 526 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 C15orf41Q9Y2V0 281 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 TMEM191CA6NGB0 347 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 TMEM191BP0C7N4 346 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 GRAMD1AQ96CP6 724 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 PDLIM7Q9NR12 457 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 DCTN4Q9UJW0 460 aa13.6□□□□□ -0.23
SHC1-210ENST00000448116 ASMTLO95671 621 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 KRT4P19013 534 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 MMP8P22894 467 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 TBXAS1P24557 533 aaPredicted RBP13.59□□□□□ -0.23
SHC1-210ENST00000448116 GCAP28676 217 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 ALDH3A1P30838 453 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 MYL6P60660 151 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 TFAMQ00059 246 aaKnown RBP13.59□□□□□ -0.23
SHC1-210ENST00000448116 EFTUD2Q15029 972 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 23.1
SHC1-210ENST00000448116 RNF43Q68DV7 783 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 LVRNQ6Q4G3 990 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 ABHD15Q6UXT9 468 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 ALLCQ8N6M5 410 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 ANKLE1Q8NAG6 615 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 PYROXD1Q8WU10 500 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 VCPIP1Q96JH7 1222 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 MTMR12Q9C0I1 747 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 PDGFDQ9GZP0 370 aaPredicted RBP13.59□□□□□ -0.23
SHC1-210ENST00000448116 ZNF302Q9NR11 478 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 NXF1Q9UBU9 619 aaKnown RBP13.59□□□□□ -0.23
SHC1-210ENST00000448116 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 UNC5CO95185 931 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 SP2Q02086 613 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 BBS9Q3SYG4 887 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 GNPTABQ3T906 1256 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 SLFN12LQ6IEE8 588 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 CEP128Q6ZU80 1094 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 TTC25Q96NG3 672 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 CGRRF1Q99675 332 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 PCSK1NQ9UHG2 260 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 GRID1Q9ULK0 1009 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 EDN1P05305 212 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 SRGAP2CP0DJJ0 459 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 CCND1P24385 295 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 ZNF252P-AS1Q0IIN9 211 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 OVGP1Q12889 678 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 ORC1Q13415 861 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 TRPC3Q13507 836 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 TFDP1Q14186 410 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 NBPF12Q5TAG4 269 aaPredicted RBP13.59□□□□□ -0.23
SHC1-210ENST00000448116 DPH6Q7L8W6 267 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 SAMD7Q7Z3H4 446 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 CDR2LQ86X02 465 aaPredicted RBP13.59□□□□□ -0.23
SHC1-210ENST00000448116 RHPN2Q8IUC4 686 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 TMEM35BQ8NCS4 154 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 NPHS2Q9NP85 383 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 TXLNGQ9NUQ3 528 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 PGAP2Q9UHJ9 254 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 CHKBQ9Y259 395 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 ACTL7BQ9Y614 415 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 USH1CQ9Y6N9 552 aa13.59□□□□□ -0.23
SHC1-210ENST00000448116 PEX10O60683 326 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 CBX6O95503 412 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 SUPT20HL2P0C7V6 817 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 VCPP55072 806 aaKnown RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 GHRHRQ02643 423 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 HIF1AQ16665 826 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 SUPT20HL1Q3ZLR7 823 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 RIBC1Q8N443 379 aaPredicted RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 MAK16Q9BXY0 300 aaKnown RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 LDHAP00338 332 aaKnown RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 ABHD2P08910 425 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 ATP4AP20648 1035 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 PSMA2P25787 234 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 NR1H3Q13133 447 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 TFDP3Q5H9I0 405 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 PALM2Q8IXS6 379 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 AGBL3Q8NEM8 1001 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 ACTL9Q8TC94 416 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 RSAD2Q8WXG1 361 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 L3MBTL3Q96JM7 780 aaPredicted RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 SYNCQ9H7C4 482 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 H0Y3Z8 333 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 PPP1R12AO14974 1030 aaPredicted RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 CST8O60676 142 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 CALB1P05937 261 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 RTP1P59025 263 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 OTUD4Q01804 1114 aaKnown RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 FSTL1Q12841 308 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 PRKG1Q13976 671 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 ANKRD22Q5VYY1 191 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 TLDC1Q6P9B6 456 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 C3orf62Q6ZUJ4 267 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 EEPD1Q7L9B9 569 aa13.58□□□□□ -0.24
SHC1-210ENST00000448116 RAB3IPQ96QF0 476 aaPredicted RBP13.58□□□□□ -0.24
SHC1-210ENST00000448116 LBHD1Q9BQE6 289 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms