RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 KIF11P52732 1056 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 YWHAHQ04917 246 aaPredicted RBP20.79■□□□□ 0.92
SGCE-207ENST00000447873 ASTE1Q2TB18 679 aaPredicted RBP20.79■□□□□ 0.92
SGCE-207ENST00000447873 THEM5Q8N1Q8 247 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 SLC39A11Q8N1S5 342 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 SP7Q8TDD2 431 aaPredicted RBP20.79■□□□□ 0.92
SGCE-207ENST00000447873 ZNF606Q8WXB4 792 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 TMEM169Q96HH4 297 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 TNIP3Q96KP6 325 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 GDF15Q99988 308 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 PDCL3Q9H2J4 239 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 KIAA1257Q9ULG3 409 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 PCDHB12Q9Y5F1 795 aa20.79■□□□□ 0.92
SGCE-207ENST00000447873 VWA8A3KMH1 1905 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 MMEP08473 750 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 VDRP11473 427 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 TKTP29401 623 aaKnown RBP20.78■□□□□ 0.92
SGCE-207ENST00000447873 PPM1AP35813 382 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 RABGGTBP53611 331 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 BMS1Q14692 1282 aaKnown RBP20.78■□□□□ 0.92
SGCE-207ENST00000447873 CEP57Q86XR8 500 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 GLYCTKQ8IVS8 523 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 CRYBG2Q8N1P7 616 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 DDX1Q92499 740 aaKnown RBP20.78■□□□□ 0.92
SGCE-207ENST00000447873 SYT11Q9BT88 431 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 DPEP3Q9H4B8 488 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 SPG21Q9NZD8 308 aa20.78■□□□□ 0.92
SGCE-207ENST00000447873 LCHNA4D1U4 455 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 MED7O43513 233 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 NDUFA10O95299 355 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 IPO7O95373 1038 aaKnown RBP20.77■□□□□ 0.92
SGCE-207ENST00000447873 CHRNB2P17787 502 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 ACAT1P24752 427 aaKnown RBP20.77■□□□□ 0.92
SGCE-207ENST00000447873 BRD2P25440 801 aaKnown RBP20.77■□□□□ 0.92
SGCE-207ENST00000447873 PCSK1P29120 753 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 GFPT1Q06210 699 aaPredicted RBP20.77■□□□□ 0.92
SGCE-207ENST00000447873 SLC18A3Q16572 532 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 SGO2Q562F6 1265 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.77■□□□□ 0.92
SGCE-207ENST00000447873 TFAP2BQ92481 460 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 CLP1Q92989 425 aaKnown RBP20.77■□□□□ 0.92
SGCE-207ENST00000447873 SPTLC3Q9NUV7 552 aa20.77■□□□□ 0.92
SGCE-207ENST00000447873 A0A087X0T9 212 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 FAM228BP0C875 321 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 FGFR3P22607 806 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 FMO1Q01740 532 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 VARS2Q5ST30 1063 aaKnown RBP20.76■□□□□ 0.91
SGCE-207ENST00000447873 C12orf29Q8N999 325 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 B3GALNT2Q8NCR0 500 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 LNX1Q8TBB1 728 aaPredicted RBP20.76■□□□□ 0.91
SGCE-207ENST00000447873 SYT15Q9BQS2 421 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 ZSWIM1Q9BR11 485 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 ACBD6Q9BR61 282 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 CDH9Q9ULB4 789 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 LAMA2P24043 3122 aaKnown RBP20.76■□□□□ 0.91
SGCE-207ENST00000447873 NLRC5Q86WI3 1866 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 GBF1Q92538 1859 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 GRXCR1A8MXD5 290 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 EIF3CLB5ME19 914 aaKnown RBP20.76■□□□□ 0.91
SGCE-207ENST00000447873 DDX3XO00571 662 aaKnown RBP eCLIP20.76■□□□□ 0.912e-26■■■□□ 14.6
SGCE-207ENST00000447873 OAZ2O95190 189 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 PSMC1P62191 440 aaKnown RBP20.76■□□□□ 0.91
SGCE-207ENST00000447873 SPA17Q15506 151 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 FAM109BQ6ICB4 259 aaPredicted RBP20.76■□□□□ 0.91
SGCE-207ENST00000447873 TOGARAM2Q6ZUX3 1019 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 B3GALT6Q96L58 329 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 EIF3CQ99613 913 aaKnown RBP20.76■□□□□ 0.91
SGCE-207ENST00000447873 RTP3Q9BQQ7 232 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 TTPALQ9BTX7 342 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 FAM49BQ9NUQ9 324 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 PYCARDQ9ULZ3 195 aa20.76■□□□□ 0.91
SGCE-207ENST00000447873 TNRC18O15417 2968 aaPredicted RBP20.75■□□□□ 0.91
SGCE-207ENST00000447873 EFEMP2O95967 443 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 LINC00271P0C7V0 271 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 PTPN1P18031 435 aaKnown RBP20.75■□□□□ 0.91
SGCE-207ENST00000447873 RGS19P49795 217 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 STILQ15468 1287 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 USP41Q3LFD5 358 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 TAS1R1Q7RTX1 841 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 SLC30A5Q8TAD4 765 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 DESI2Q9BSY9 194 aa20.75■□□□□ 0.91
SGCE-207ENST00000447873 ATP2C2O75185 946 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 SOD2P04179 222 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 SSTR3P32745 418 aaPredicted RBP20.74■□□□□ 0.91
SGCE-207ENST00000447873 CYP27A1Q02318 531 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 KRT17Q04695 432 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 CNGA2Q16280 664 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 ZNF280DQ6N043 979 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 KIAA1841Q6NSI8 718 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 RNF168Q8IYW5 571 aaPredicted RBP20.74■□□□□ 0.91
SGCE-207ENST00000447873 OLIG1Q8TAK6 271 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 CYFIP2Q96F07 1278 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 PCDHB18PQ96TA0 734 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 LPIN3Q9BQK8 851 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 VN1R3Q9BXE9 311 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 NAGPAQ9UK23 515 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 ZKSCAN5Q9Y2L8 839 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 RWDD3Q9Y3V2 267 aa20.74■□□□□ 0.91
SGCE-207ENST00000447873 LINC01553A4QN01 128 aa20.73■□□□□ 0.91
SGCE-207ENST00000447873 O00370 1275 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms