RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 SLC6A15Q9H2J7 730 aa7.32□□□□□ -1.24
COL11A1-205ENST00000447608 L2HGDHQ9H9P8 463 aa7.32□□□□□ -1.24
COL11A1-205ENST00000447608 SAYSD1Q9NPB0 183 aa7.32□□□□□ -1.24
COL11A1-205ENST00000447608 HEYLQ9NQ87 328 aaPredicted RBP7.32□□□□□ -1.24
COL11A1-205ENST00000447608 RGS17Q9UGC6 210 aaPredicted RBP7.32□□□□□ -1.24
COL11A1-205ENST00000447608 HERC5Q9UII4 1024 aaKnown RBP7.32□□□□□ -1.24
COL11A1-205ENST00000447608 FEM1BQ9UK73 627 aa7.32□□□□□ -1.24
COL11A1-205ENST00000447608 ZMYND8Q9ULU4 1186 aaPredicted RBP7.32□□□□□ -1.24
COL11A1-205ENST00000447608 TMEM98Q9Y2Y6 226 aa7.32□□□□□ -1.24
COL11A1-205ENST00000447608 ZNF608Q9ULD9 1512 aaPredicted RBP7.32□□□□□ -1.24
COL11A1-205ENST00000447608 SETD1BQ9UPS6 1966 aaKnown RBP7.31□□□□□ -1.24
COL11A1-205ENST00000447608 PNPLA7Q6ZV29 1317 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 MYOCOSA0A1B0GUC4 107 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 FAM155BO75949 473 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 USP1O94782 785 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 ITGA2BP08514 1039 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 ZNF28P17035 718 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 XBP1P17861 261 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 ACVR2AP27037 513 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 KRT9P35527 623 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 ADD2P35612 726 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 PNLIPRP1P54315 467 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 ADAM8P78325 824 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 FSTL1Q12841 308 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 KCNMB1Q16558 191 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 MAPKAPK3Q16644 382 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 UTP14CQ5TAP6 766 aaKnown RBP7.31□□□□□ -1.24
COL11A1-205ENST00000447608 ZSWIM9Q86XI8 627 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 GATAD2AQ86YP4 633 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 HERC6Q8IVU3 1022 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 CCDC117Q8IWD4 279 aaPredicted RBP7.31□□□□□ -1.24
COL11A1-205ENST00000447608 ABI1Q8IZP0 508 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 AOPEPQ8N6M6 819 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 NLGN4YQ8NFZ3 816 aaPredicted RBP7.31□□□□□ -1.24
COL11A1-205ENST00000447608 OR14K1Q8NGZ2 314 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 DDX17Q92841 729 aaKnown RBP7.31□□□□□ -1.24
COL11A1-205ENST00000447608 GSTO2Q9H4Y5 243 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 BLOC1S4Q9NUP1 217 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 SLC13A4Q9UKG4 626 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 HS3ST4Q9Y661 456 aa7.31□□□□□ -1.24
COL11A1-205ENST00000447608 H7C4K7 107 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 HOXC11O43248 304 aaPredicted RBP7.3□□□□□ -1.24
COL11A1-205ENST00000447608 SOAT2O75908 522 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 HAUS5O94927 633 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 PLA2G1BP04054 148 aaKnown RBP7.3□□□□□ -1.24
COL11A1-205ENST00000447608 PIM1P11309 404 aaPredicted RBP7.3□□□□□ -1.24
COL11A1-205ENST00000447608 CKBP12277 381 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 NPPBP16860 134 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 EGR1P18146 543 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 ITGB7P26010 798 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 CST5P28325 142 aaPredicted RBP7.3□□□□□ -1.24
COL11A1-205ENST00000447608 LIFRP42702 1097 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 PTTG1IPP53801 180 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 RAP2BP61225 183 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 CUL4BQ13620 913 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 TBR1Q16650 682 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 GAGE13Q4V321 117 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 AMOTQ4VCS5 1084 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 TMEM132EQ6IEE7 984 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 ATG4DQ86TL0 474 aaPredicted RBP7.3□□□□□ -1.24
COL11A1-205ENST00000447608 PCYOX1LQ8NBM8 494 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 FAM46DQ8NEK8 389 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 HERVK_113Q902F9 699 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 AJUBAQ96IF1 538 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 SGPP1Q9BX95 441 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 KCNK12Q9HB15 430 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 PCMTD2Q9NV79 361 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 FBXO34Q9NWN3 711 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 MTO1Q9Y2Z2 717 aaKnown RBP7.3□□□□□ -1.24
COL11A1-205ENST00000447608 RABGAP1Q9Y3P9 1069 aa7.3□□□□□ -1.24
COL11A1-205ENST00000447608 ARHGEF11O15085 1522 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 PEX10O60683 326 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 BAIAP3O94812 1187 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 KIF20AO95235 890 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 AMHP03971 560 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 JUPP14923 745 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 PECAM1P16284 738 aaPredicted RBP7.29□□□□□ -1.24
COL11A1-205ENST00000447608 MRPL49Q13405 166 aaKnown RBP7.29□□□□□ -1.24
COL11A1-205ENST00000447608 GPATCH4Q5T3I0 446 aaKnown RBP7.29□□□□□ -1.24
COL11A1-205ENST00000447608 ANKS6Q68DC2 871 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 PLAG1Q6DJT9 500 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 USP30Q70CQ3 517 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 CCDC28AQ8IWP9 274 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 REXO1L1PQ8IX06 675 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 SLC17A8Q8NDX2 589 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 TMIEQ8NEW7 156 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 AFG1LQ8WV93 481 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 SCAMP4Q969E2 229 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 GPHA2Q96T91 129 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 SPATA5L1Q9BVQ7 753 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 PABPC3Q9H361 631 aaKnown RBP7.29□□□□□ -1.24
COL11A1-205ENST00000447608 MRPS18AQ9NVS2 196 aaKnown RBP7.29□□□□□ -1.24
COL11A1-205ENST00000447608 LPAR3Q9UBY5 353 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 CAPN11Q9UMQ6 739 aa7.29□□□□□ -1.24
COL11A1-205ENST00000447608 PBRM1Q86U86 1689 aa7.28□□□□□ -1.24
COL11A1-205ENST00000447608 LOC102723971A0A1B0GUV8 181 aa7.28□□□□□ -1.24
COL11A1-205ENST00000447608 B4E171 279 aa7.28□□□□□ -1.24
COL11A1-205ENST00000447608 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.28□□□□□ -1.24
COL11A1-205ENST00000447608 ACTL6BO94805 426 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms