RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 K7ERI5 159 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 TNFRSF10BO14763 440 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SEC24BO95487 1268 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SPATA31C1P0DKV0 1188 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ENGP17813 658 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 PSMA5P28066 241 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 HOXD12P35452 270 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 AVPR1AP37288 418 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 TUFMP49411 452 aaKnown RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SCAPQ12770 1279 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 MYBPC2Q14324 1141 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 PDGFRLQ15198 375 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 CALCRLQ16602 461 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 TRIM68Q6AZZ1 485 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SLC23A3Q6PIS1 610 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 USP37Q86T82 979 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SYT12Q8IV01 421 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 CHCHD4Q8N4Q1 142 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 KCTD17Q8N5Z5 321 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 CEP120Q8N960 986 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 GLIS3Q8NEA6 775 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 TSTD1Q8NFU3 115 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 C18orf25Q96B23 403 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ZNF274Q96GC6 653 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 IFT74Q96LB3 600 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 CNOT6LQ96LI5 555 aaKnown RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ACAP3Q96P50 834 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 BBC3Q96PG8 261 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 GCNAQ96QF7 691 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ACO2Q99798 780 aaKnown RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 POLR3CQ9BUI4 534 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SLC46A2Q9BY10 475 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 CDT1Q9H211 546 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 CCDC86Q9H6F5 360 aaKnown RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 KIF9Q9HAQ2 790 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 PTPRHQ9HD43 1115 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 TUFT1Q9NNX1 390 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SCUBE2Q9NQ36 999 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 SLC27A5Q9Y2P5 690 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ASCC3Q8N3C0 2202 aaKnown RBP7.72□□□□□ -1.17
LRRC28-203ENST00000447360 APC2O95996 2303 aa7.72□□□□□ -1.17
LRRC28-203ENST00000447360 ASXL3Q9C0F0 2248 aa7.71□□□□□ -1.17
LRRC28-203ENST00000447360 CFAP46Q8IYW2 2715 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 MTMR11A4FU01 709 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 CENPBP07199 599 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 OR4Q2P0C623 313 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 MCF2P10911 925 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 BCKDHBP21953 392 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 DDX6P26196 483 aaKnown RBP eCLIP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 GJA4P35212 333 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 CLCN1P35523 988 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 MAPK8P45983 427 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 DHPSP49366 369 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 AARSP49588 968 aaKnown RBP eCLIP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 OSTNP61366 133 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 CYP4F8P98187 520 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 BFSP1Q12934 665 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 TOB2Q14106 344 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 VEPH1Q14D04 833 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 ZNF568Q3ZCX4 644 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 EARS2Q5JPH6 523 aaKnown RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 CC2D1AQ6P1N0 951 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 PADI6Q6TGC4 694 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 RUFY3Q7L099 469 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 LPCAT2Q7L5N7 544 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 CATSPER3Q86XQ3 398 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 HDDC3Q8N4P3 179 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 ATAD1Q8NBU5 361 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 ADAM32Q8TC27 787 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 KIFAP3Q92845 792 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 USP13Q92995 863 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 CD101Q93033 1021 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 CCDC97Q96F63 343 aaPredicted RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 KIFC3Q9BVG8 833 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 TPSD1Q9BZJ3 242 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 TM6SF1Q9BZW5 370 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 SMG9Q9H0W8 520 aaKnown RBP7.71□□□□□ -1.18
LRRC28-203ENST00000447360 IL21Q9HBE4 155 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 TDP1Q9NUW8 608 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 INVSQ9Y283 1065 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 PHLPP2Q6ZVD8 1323 aa7.71□□□□□ -1.18
LRRC28-203ENST00000447360 ARHGEF35A5YM69 484 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 NEMFO60524 1076 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 CDKL5O76039 1030 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 LARGE1O95461 756 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 ARSAP15289 507 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 TYMPP19971 482 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 FECHP22830 423 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 PROZP22891 400 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 LRPAP1P30533 357 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 TXKP42681 527 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 ATXN3P54252 364 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-203ENST00000447360 ZNF268Q14587 947 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-203ENST00000447360 PEAR1Q5VY43 1037 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-203ENST00000447360 LMBRD2Q68DH5 695 aaPredicted RBP7.7□□□□□ -1.18
LRRC28-203ENST00000447360 OVOS1Q6IE37 1185 aa7.7□□□□□ -1.18
LRRC28-203ENST00000447360 ANO7Q6IWH7 933 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms