RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 CEP63Q96MT8 703 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 NECTIN4Q96NY8 510 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 SEPT5Q99719 369 aaPredicted RBP12.77□□□□□ -0.37
RFC4-208ENST00000447345 PHF7Q9BWX1 381 aaPredicted RBP12.77□□□□□ -0.37
RFC4-208ENST00000447345 IMPG2Q9BZV3 1241 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 SNX25Q9H3E2 840 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 TMEM8AQ9HCN3 771 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 CD320Q9NPF0 282 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 TMLHEQ9NVH6 421 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 HCFC1R1Q9NWW0 138 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 RWDD2AQ9UIY3 292 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 YIPF1Q9Y548 306 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 CLUHO75153 1309 aa12.77□□□□□ -0.37
RFC4-208ENST00000447345 XYLBO75191 536 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 LRRN2O75325 713 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 STAU1O95793 577 aaKnown RBP12.76□□□□□ -0.37
RFC4-208ENST00000447345 PDGFRBP09619 1106 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 HNRNPA1P09651 372 aaKnown RBP eCLIP12.76□□□□□ -0.37
RFC4-208ENST00000447345 LMO2P25791 158 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 CDH8P55286 799 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 NOP14P78316 857 aaKnown RBP12.76□□□□□ -0.37
RFC4-208ENST00000447345 MGAT5BQ3V5L5 792 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 CBWD6Q4V339 395 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 INTS6LQ5JSJ4 861 aaKnown RBP12.76□□□□□ -0.37
RFC4-208ENST00000447345 CBWD3Q5JTY5 395 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 CBWD5Q5RIA9 395 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 CCDC183Q5T5S1 534 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 KRT39Q6A163 491 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 LRRTM3Q86VH5 581 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 TCEAL8Q8IYN2 117 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 MLKLQ8NB16 471 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 OR6B3Q8NGW1 331 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 SRRTQ9BXP5 876 aaKnown RBP12.76□□□□□ -0.37
RFC4-208ENST00000447345 SDCBP2Q9H190 292 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 PRKAG3Q9UGI9 489 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 PATJQ8NI35 1801 aa12.76□□□□□ -0.37
RFC4-208ENST00000447345 C2CD4DB7Z1M9 353 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 DLL1O00548 723 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 GABRDO14764 452 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 STX10O60499 249 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 ATP2C2O75185 946 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
RFC4-208ENST00000447345 WARSP23381 471 aaKnown RBP12.75□□□□□ -0.37
RFC4-208ENST00000447345 PCSK1P29120 753 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 HOXA9P31269 272 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 LHX1P48742 406 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 ENPEPQ07075 957 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 TPD52L1Q16890 204 aaPredicted RBP12.75□□□□□ -0.37
RFC4-208ENST00000447345 SGSM1Q2NKQ1 1148 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 UVSSAQ2YD98 709 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 HSP90AA4PQ58FG1 418 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 CAVIN1Q6NZI2 390 aaKnown RBP12.75□□□□□ -0.37
RFC4-208ENST00000447345 DPH6Q7L8W6 267 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 FRMD5Q7Z6J6 570 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 FILIP1Q7Z7B0 1213 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 DCP1BQ8IZD4 617 aaKnown RBP12.75□□□□□ -0.37
RFC4-208ENST00000447345 GJD3Q8N144 294 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 TDRD5Q8NAT2 981 aaKnown RBP12.75□□□□□ -0.37
RFC4-208ENST00000447345 CCDC150Q8NCX0 1101 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 SLC35C1Q96A29 364 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 MED15Q96RN5 788 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 LPIN3Q9BQK8 851 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 RHOBTB2Q9BYZ6 727 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 DPEP3Q9H4B8 488 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 METTL14Q9HCE5 456 aaKnown RBP12.75□□□□□ -0.37
RFC4-208ENST00000447345 TMEM63CQ9P1W3 806 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 DACH1Q9UI36 760 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 GTF3C4Q9UKN8 822 aa12.75□□□□□ -0.37
RFC4-208ENST00000447345 NUP210Q8TEM1 1887 aaPredicted RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 MYBPHLA2RUH7 354 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 A8MXQ7 604 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 P4HA1P13674 534 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 GBP2P32456 591 aaPredicted RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 GTF2H1P32780 548 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 ASPAP45381 313 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 ORC1Q13415 861 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 PABPC1LQ4VXU2 614 aaKnown RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 MDH1BQ5I0G3 518 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 FOXR2Q6PJQ5 311 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 SASS6Q6UVJ0 657 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 RBM43Q6ZSC3 357 aaKnown RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 LIMS2Q7Z4I7 341 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 ELMOD1Q8N336 334 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 STKLD1Q8NE28 680 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 FBXL13Q8NEE6 735 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 SPATA18Q8TC71 538 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 GPR152Q8TDT2 470 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 ING5Q8WYH8 240 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 TAF4BQ92750 862 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 MYLPFQ96A32 169 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
RFC4-208ENST00000447345 CORO1BQ9BR76 489 aa12.74□□□□□ -0.37
RFC4-208ENST00000447345 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms