RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 PIH1D3Q9NQM4 214 aaKnown RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 FSCN3Q9NQT6 498 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 MAN1C1Q9NR34 630 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 POLR3BQ9NW08 1133 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 FEM1BQ9UK73 627 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 KCNH3Q9ULD8 1083 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 PADI3Q9ULW8 664 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 INVSQ9Y283 1065 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 HEMK1Q9Y5R4 338 aaPredicted RBP5.82□□□□□ -1.48
SDCBP-205ENST00000447267 CDY2AQ9Y6F7 541 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 COL6A6A6NMZ7 2263 aa5.82□□□□□ -1.48
SDCBP-205ENST00000447267 PCNX1Q96RV3 2341 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 CCDC194A0A1B0GVG4 234 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 B4GALT3O60512 393 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 PSPNO60542 156 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 SSBP05455 408 aaKnown RBP eCLIP5.81□□□□□ -1.48
SDCBP-205ENST00000447267 MED14OSP0DP75 135 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 EDNRBP24530 442 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 SARSP49591 514 aaKnown RBP5.81□□□□□ -1.48
SDCBP-205ENST00000447267 NTHL1P78549 312 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 TFCP2Q12800 502 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 TMEM266Q2M3C6 531 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 SYDE2Q5VT97 1194 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 OVOS1Q6IE37 1185 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 ATG14Q6ZNE5 492 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 TMC8Q8IU68 726 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 PHACTR4Q8IZ21 702 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 FAM3CQ92520 227 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 PHKBQ93100 1093 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 WBP1Q96G27 269 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 ANTXR1Q9H6X2 564 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 MRS2Q9HD23 443 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 CLIP2Q9UDT6 1046 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 PCDHB14Q9Y5E9 798 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 PCNX2A6NKB5 2137 aa5.81□□□□□ -1.48
SDCBP-205ENST00000447267 MYH1P12882 1939 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 PLXNB3Q9ULL4 1909 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 DENND4AQ7Z401 1863 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 NAV1Q8NEY1 1877 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 TMEM82A0PJX8 343 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 SH3BP5O60239 455 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 PPFIA4O75335 1185 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CIAO1O76071 339 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 ATE1O95260 518 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 PAPSS2O95340 614 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CNPP09543 421 aaKnown RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 EIF4A3P38919 411 aaKnown RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 IL15P40933 162 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CLCQ05315 142 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 TMEM62Q0P6H9 643 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 BMS1Q14692 1282 aaKnown RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 NR0B2Q15466 257 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 HSDL1Q3SXM5 330 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 ZPBP2Q6X784 338 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 PPFIBP1Q86W92 1011 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 TMEM173Q86WV6 379 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CMASQ8NFW8 434 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 OR2I1PQ8NGU4 316 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 PPTC7Q8NI37 304 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 DNAJB3Q8WWF6 145 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 ZBTB10Q96DT7 871 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 MED8Q96G25 268 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CCDC17Q96LX7 622 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CASD1Q96PB1 797 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 IER2Q9BTL4 223 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 PHF20Q9BVI0 1012 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 UBP1Q9NZI7 540 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 PLEKHB1Q9UF11 243 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CCPG1Q9ULG6 757 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 LCTP09848 1927 aa5.8□□□□□ -1.48
SDCBP-205ENST00000447267 CACNA1FO60840 1977 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 MAN2B1O00754 1011 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 AFPP02771 609 aaKnown RBP5.79□□□□□ -1.48
SDCBP-205ENST00000447267 ZSCAN22P10073 491 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-205ENST00000447267 CTSAP10619 480 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 CD59P13987 128 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 CCNE1P24864 410 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 PPM1AP35813 382 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 ADAM17P78536 824 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 RHDQ02161 417 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 SEMG2Q02383 582 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 IKQ13123 557 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-205ENST00000447267 NMIQ13287 307 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-205ENST00000447267 PWP1Q13610 501 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 ELF2Q15723 593 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 KRTAP19-4Q3LI73 84 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 BBS9Q3SYG4 887 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 ARHGAP40Q5TG30 622 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 TOGARAM2Q6ZUX3 1019 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 SDR42E1Q8WUS8 393 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 LMBR1Q8WVP7 490 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 PIGKQ92643 395 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 ZNF512BQ96KM6 892 aaPredicted RBP5.79□□□□□ -1.48
SDCBP-205ENST00000447267 SPATA33Q96N06 139 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 ADAM2Q99965 735 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 FTHL17Q9BXU8 183 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 FOXP3Q9BZS1 431 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 GCM1Q9NP62 436 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 SWAP70Q9UH65 585 aa5.79□□□□□ -1.48
SDCBP-205ENST00000447267 CDH7Q9ULB5 785 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms