RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LNX1Q8TBB1 728 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 PIK3R5Q8WYR1 880 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 LRCH3Q96II8 777 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 FAM81BQ96LP2 452 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 SPAG5Q96R06 1193 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 LPIN3Q9BQK8 851 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 ZNF576Q9H609 170 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 ENTPD7Q9NQZ7 604 aa19.2■□□□□ 0.66
TRAPPC4-203ENST00000447216 F8VZ95 297 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 OAZ2O95190 189 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 CXCL14O95715 111 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 FAM163BP0C2L3 166 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 CTSAP10619 480 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 CASP14P31944 242 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 IRS1P35568 1242 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 LHX1P48742 406 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 RAD23BP54727 409 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 PSMC1P62191 440 aaKnown RBP19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 UBE3AQ05086 875 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 TBX2Q13207 712 aaPredicted RBP19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 PTPN14Q15678 1187 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 ZNF280DQ6N043 979 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 PDXDC1Q6P996 788 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 ANKS3Q6ZW76 656 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 ACOT1Q86TX2 421 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 GLYCTKQ8IVS8 523 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 THEM5Q8N1Q8 247 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 SPATA18Q8TC71 538 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 TCF25Q9BQ70 676 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 SYT15Q9BQS2 421 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 TLR9Q9NR96 1032 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 CAPN11Q9UMQ6 739 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 STXBP5LQ9Y2K9 1186 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 DAAM1Q9Y4D1 1078 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 TRANK1O15050 2925 aa19.19■□□□□ 0.66
TRAPPC4-203ENST00000447216 H7C4K7 107 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 ADAM12O43184 909 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 GFPT2O94808 682 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 OR4Q2P0C623 313 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 ARPP19P56211 112 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 TRIM14Q14142 442 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 FAM71AQ8IYT1 594 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 SLC4A11Q8NBS3 891 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 JAKMIP2Q96AA8 810 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 NT5C1AQ9BXI3 368 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 EDEM3Q9BZQ6 932 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 TTYH1Q9H313 450 aaPredicted RBP19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 ACP6Q9NPH0 428 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 MRPL17Q9NRX2 175 aaKnown RBP19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 MTRRQ9UBK8 725 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 STK39Q9UEW8 545 aa19.18■□□□□ 0.66
TRAPPC4-203ENST00000447216 MTCL1Q9Y4B5 1905 aaKnown RBP19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 A0A1W2PQJ5 194 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 LRRC53A6NM62 1247 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 FSCN2O14926 492 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 CYP26A1O43174 497 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 TBC1D4O60343 1298 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 LILRB3O75022 631 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 PCSK1P29120 753 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 SOX5P35711 763 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 STAT1P42224 750 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 ZNF132P52740 706 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 ARID5AQ03989 594 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 E4F1Q66K89 784 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 UNC93AQ86WB7 457 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 TTC39CQ8N584 583 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 MICAL1Q8TDZ2 1067 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 TMEM176AQ96HP8 235 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 CRTAC1Q9NQ79 661 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 CDH9Q9ULB4 789 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 CNTN6Q9UQ52 1028 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 LUC7L2Q9Y383 392 aaKnown RBP19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 CDY1Q9Y6F8 540 aa19.17■□□□□ 0.66
TRAPPC4-203ENST00000447216 OR6C75A6NL08 312 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 HIDE1A8MVS5 230 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 PTPN1P18031 435 aaKnown RBP19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 CLCN1P35523 988 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 KRT9P35527 623 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 ADKP55263 362 aaKnown RBP19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 ZBED6P86452 979 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 TSPY1Q01534 308 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 SMC1AQ14683 1233 aaKnown RBP19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 MDH1BQ5I0G3 518 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 INTS6LQ5JSJ4 861 aaKnown RBP19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 LRRTM3Q86VH5 581 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 C12orf29Q8N999 325 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 B3GALNT2Q8NCR0 500 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 IQCDQ96DY2 449 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 CLSTN3Q9BQT9 956 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 ACBD6Q9BR61 282 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 BACE2Q9Y5Z0 518 aa19.16■□□□□ 0.66
TRAPPC4-203ENST00000447216 MYBPHLA2RUH7 354 aa19.15■□□□□ 0.66
TRAPPC4-203ENST00000447216 LPXNO60711 386 aa19.15■□□□□ 0.66
TRAPPC4-203ENST00000447216 TPM1P09493 284 aa19.15■□□□□ 0.66
TRAPPC4-203ENST00000447216 CD19P15391 556 aa19.15■□□□□ 0.66
TRAPPC4-203ENST00000447216 BRD2P25440 801 aaKnown RBP19.15■□□□□ 0.66
TRAPPC4-203ENST00000447216 OR1D2P34982 312 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms