RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 SKAP1Q86WV1 359 aa10.97□□□□□ -0.65
COMMD1-203ENST00000444166 KIFAP3Q92845 792 aa10.97□□□□□ -0.65
COMMD1-203ENST00000444166 CNOT6LQ96LI5 555 aaKnown RBP10.97□□□□□ -0.65
COMMD1-203ENST00000444166 BBC3Q96PG8 261 aaPredicted RBP10.97□□□□□ -0.65
COMMD1-203ENST00000444166 LPIN3Q9BQK8 851 aa10.97□□□□□ -0.65
COMMD1-203ENST00000444166 MRPL4Q9BYD3 311 aaKnown RBP10.97□□□□□ -0.65
COMMD1-203ENST00000444166 ARHGAP28Q9P2N2 729 aa10.97□□□□□ -0.65
COMMD1-203ENST00000444166 TNRC6BQ9UPQ9 1833 aaKnown RBP10.97□□□□□ -0.65
COMMD1-203ENST00000444166 ZNF462Q96JM2 2506 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 DTNBO60941 627 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 CDKL5O76039 1030 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 ZIC2O95409 532 aaPredicted RBP10.96□□□□□ -0.65
COMMD1-203ENST00000444166 TYMPP19971 482 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 RPA1P27694 616 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 KRT2P35908 639 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 NPTX2P47972 431 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 SCRN1Q12765 414 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 PDGFRLQ15198 375 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 ZBTB6Q15916 424 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 COL28A1Q2UY09 1125 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 MPZL3Q6UWV2 235 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 RAB44Q7Z6P3 723 aaPredicted RBP10.96□□□□□ -0.65
COMMD1-203ENST00000444166 CHCHD4Q8N4Q1 142 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 TSTD1Q8NFU3 115 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 OLIG1Q8TAK6 271 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 PIGKQ92643 395 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 TPSD1Q9BZJ3 242 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 KIF9Q9HAQ2 790 aa10.96□□□□□ -0.65
COMMD1-203ENST00000444166 ZNF638Q14966 1978 aaKnown RBP10.96□□□□□ -0.66
COMMD1-203ENST00000444166 TNFRSF10BO14763 440 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 CTDNEP1O95476 244 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 ENGP17813 658 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 MAPK8P45983 427 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 DHPSP49366 369 aaPredicted RBP10.95□□□□□ -0.66
COMMD1-203ENST00000444166 FAM193AP78312 1265 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 SCAPQ12770 1279 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 ZNF268Q14587 947 aaPredicted RBP10.95□□□□□ -0.66
COMMD1-203ENST00000444166 VEPH1Q14D04 833 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 OVOS1Q6IE37 1185 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 ANO7Q6IWH7 933 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 USP37Q86T82 979 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 DAW1Q8N136 415 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 MDGA1Q8NFP4 955 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 OR10T2Q8NGX3 314 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 USP33Q8TEY7 942 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 ZBTB45Q96K62 511 aaPredicted RBP10.95□□□□□ -0.66
COMMD1-203ENST00000444166 GCNAQ96QF7 691 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 ECT2Q9H8V3 914 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 TMEM74BQ9NUR3 256 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 TDP1Q9NUW8 608 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 TENM4Q6N022 2769 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 TSC2P49815 1807 aa10.95□□□□□ -0.66
COMMD1-203ENST00000444166 PLXND1Q9Y4D7 1925 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 OBSL1O75147 1896 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 TTC26A0AVF1 554 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 F11P03951 625 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 CHRM1P11229 460 aaPredicted RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 HMGA1P17096 107 aaKnown RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 CYP3A5P20815 502 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 MUTP22033 750 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 DDX6P26196 483 aaKnown RBP eCLIP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 NMT1P30419 496 aaKnown RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 AVPR1AP37288 418 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 P2RY2P41231 377 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 PTGER3P43115 390 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 TUFMP49411 452 aaKnown RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 PEX3P56589 373 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 NLRP12P59046 1061 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 BFSP1Q12934 665 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 ECM1Q16610 540 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 ZNF423Q2M1K9 1284 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 SEZ6Q53EL9 994 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 PEAR1Q5VY43 1037 aaPredicted RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 SLC23A3Q6PIS1 610 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 SYT12Q8IV01 421 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 CPA6Q8N4T0 437 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 MAB21L3Q8N8X9 362 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 CD101Q93033 1021 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 EXOC4Q96A65 974 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 FNBP1Q96RU3 617 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 SEPT5Q99719 369 aaPredicted RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 TCHPQ9BT92 498 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 NUSAP1Q9BXS6 441 aaKnown RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 BHMT2Q9H2M3 363 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 CACNA2D2Q9NY47 1150 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.94□□□□□ -0.66
COMMD1-203ENST00000444166 SPTA1P02549 2419 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 PCDH15Q96QU1 1955 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 PLXNB3Q9ULL4 1909 aa10.94□□□□□ -0.66
COMMD1-203ENST00000444166 MYO18BQ8IUG5 2567 aa10.93□□□□□ -0.66
COMMD1-203ENST00000444166 ANTXRLA6NF34 631 aa10.93□□□□□ -0.66
COMMD1-203ENST00000444166 CCDC169A6NNP5 214 aa10.93□□□□□ -0.66
COMMD1-203ENST00000444166 BTBD18B2RXH4 712 aa10.93□□□□□ -0.66
COMMD1-203ENST00000444166 PPEF2O14830 753 aa10.93□□□□□ -0.66
COMMD1-203ENST00000444166 TOM1L1O75674 476 aa10.93□□□□□ -0.66
COMMD1-203ENST00000444166 CXCL8P10145 99 aa10.93□□□□□ -0.66
COMMD1-203ENST00000444166 HARSP12081 509 aaKnown RBP10.93□□□□□ -0.66
COMMD1-203ENST00000444166 FDPSP14324 419 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms