RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 DYRK4Q9NR20 520 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 SF3B1O75533 1304 aaKnown RBP eCLIP14.84□□□□□ -0.034e-6■■■■■ 127.4
SMARCA4-204ENST00000444061 CCND3P30281 292 aaPredicted RBP14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 CTNNA1P35221 906 aaKnown RBP14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 MAP3K7CLP57077 242 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 PTK7Q13308 1070 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 SLC24A5Q71RS6 500 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 MIB1Q86YT6 1006 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 ANKS4BQ8N8V4 417 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 TATDN2Q93075 761 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 NRAPQ86VF7 1730 aa14.84□□□□□ -0.03
SMARCA4-204ENST00000444061 LRRIQ3A6PVS8 624 aaPredicted RBP14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 ZNF862O60290 1169 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 MYL4P12829 197 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 AVPR1AP37288 418 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 NCKAP1LP55160 1127 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 DR1Q01658 176 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 OTOP2Q7RTS6 562 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 PDIK1LQ8N165 341 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 TMEM86AQ8N2M4 240 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 CCDC110Q8TBZ0 833 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 RABGGTAQ92696 567 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 PGLYRP2Q96PD5 576 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 DHX33Q9H6R0 707 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 METTL5Q9NRN9 209 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 TRMT13Q9NUP7 481 aaKnown RBP14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 DDIT4Q9NX09 232 aa14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.83□□□□□ -0.03
SMARCA4-204ENST00000444061 DFFAO00273 331 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 SGPL1O95470 568 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 GARSP41250 739 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 ZNF200P98182 395 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 SLC35G2Q8TBE7 412 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 FAF2Q96CS3 445 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 ZMYND8Q9ULU4 1186 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 CYP11B1P15538 503 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 GRM5P41594 1212 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 SLC11A2P49281 568 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 AP1B1Q10567 949 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 MTF1Q14872 753 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 CDKL3Q8IVW4 592 aaPredicted RBP14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 UHMK1Q8TAS1 419 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 SGIP1Q9BQI5 828 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 SLC28A3Q9HAS3 691 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 APOL1O14791 398 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 XYLBO75191 536 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 FBXO21O94952 628 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 SETSIPP0DME0 302 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 TUFMP49411 452 aaKnown RBP14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 BBS9Q3SYG4 887 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 HHATQ5VTY9 493 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 ITPRIPL1Q6GPH6 555 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 TTC25Q96NG3 672 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 IGFLR1Q9H665 355 aa14.83□□□□□ -0.04
SMARCA4-204ENST00000444061 F8W8V4 182 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 ARVCFO00192 962 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 PPP1R12AO14974 1030 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 MAP3K10Q02779 954 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 BST2Q10589 180 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 GRIK3Q13003 919 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 PLD1Q13393 1074 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 DDX53Q86TM3 631 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 ATP6V0D2Q8N8Y2 350 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 GLIS3Q8NEA6 775 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 AFAP1L1Q8TED9 768 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 ZNF518BQ9C0D4 1074 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 IRS2Q9Y4H2 1338 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 BUB1BO60566 1050 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 CDKAL1Q5VV42 579 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 ACAD10Q6JQN1 1059 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 FEZF2Q8TBJ5 459 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 EPB41L5Q9HCM4 733 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 TMEM253P0C7T8 217 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 PPARGP37231 505 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 PDE1BQ01064 536 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 C2orf54Q08AI8 447 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 LRRC43Q8N309 656 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 DUSP9Q99956 384 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 TOGARAM1Q9Y4F4 1720 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 NFICP08651 508 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 NR1H3Q13133 447 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 ERCC6LQ2NKX8 1250 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 PPM1LQ5SGD2 360 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 UNC93B1Q9H1C4 597 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 GTF3C4Q9UKN8 822 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 PLAGL2Q9UPG8 496 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 C2CD2Q9Y426 696 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 IPPQ9Y573 584 aa14.82□□□□□ -0.04
SMARCA4-204ENST00000444061 M0QYT0 321 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 GCNT1Q02742 428 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 MKRN4PQ13434 485 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 AFAP1L2Q8N4X5 818 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 MORC2Q9Y6X9 1032 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 CNTNAP2Q9UHC6 1331 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 EEF2KO00418 725 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 RGS16O15492 202 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 ARIH2O95376 493 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 INHBAP08476 426 aa14.81□□□□□ -0.04
SMARCA4-204ENST00000444061 MX2P20592 715 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms