RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ELSPBP1Q96BH3 223 aa20.23■□□□□ 0.83
ATPAF2-201ENST00000444058 CCDC127Q96BQ5 260 aa20.23■□□□□ 0.83
ATPAF2-201ENST00000444058 FAM84AQ96KN4 292 aa20.23■□□□□ 0.83
ATPAF2-201ENST00000444058 GOLPH3LQ9H4A5 285 aa20.23■□□□□ 0.83
ATPAF2-201ENST00000444058 DMAC2Q9NW81 257 aa20.23■□□□□ 0.83
ATPAF2-201ENST00000444058 KMT2EQ8IZD2 1858 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 TCHHQ07283 1943 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 STAU1O95793 577 aaKnown RBP20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 FAM163BP0C2L3 166 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 MYL4P12829 197 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 AOC1P19801 751 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 PCSK1P29120 753 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 AP3M2P53677 418 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 PTPN5P54829 565 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 GPC5P78333 572 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 CLDN10P78369 228 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 PFKPQ01813 784 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 KCNB1Q14721 858 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 SOWAHAQ2M3V2 549 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 CWF19L1Q69YN2 538 aaKnown RBP20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 POTEHQ6S545 545 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 TTC9BQ8N6N2 239 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 TMEM105Q8N8V8 129 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 SMARCD2Q92925 531 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 ASB16Q96NS5 453 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 IRF2BPLQ9H1B7 796 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 TRPV4Q9HBA0 871 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 GDPD2Q9HCC8 539 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 ZFP14Q9HCL3 533 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 ABCB6Q9NP58 842 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 ARHGEF3Q9NR81 526 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 DDX43Q9NXZ2 648 aaKnown RBP20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 PCDHB5Q9Y5E4 795 aa20.22■□□□□ 0.83
ATPAF2-201ENST00000444058 KRBA1A5PL33 1030 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 HAPLN1P10915 354 aaPredicted RBP20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 VEPH1Q14D04 833 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 MGAT5BQ3V5L5 792 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 INTS6LQ5JSJ4 861 aaKnown RBP20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 FAM78AQ5JUQ0 283 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 PHLDB3Q6NSJ2 640 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 ADGRF2Q8IZF7 708 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 PRSS33Q8NF86 280 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 FLCNQ8NFG4 579 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 SHDQ96IW2 340 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 SEPT5Q99719 369 aaPredicted RBP20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 KXD1Q9BQD3 176 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 GZF1Q9H116 711 aaPredicted RBP20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 TRAF3IP3Q9Y228 551 aa20.21■□□□□ 0.83
ATPAF2-201ENST00000444058 ATF6P18850 670 aa20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 FCARP24071 287 aa20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 TANGO2Q6ICL3 276 aa20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 ST13P5Q8NFI4 369 aaPredicted RBP20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 SHKBP1Q8TBC3 707 aa20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 PARD3BQ8TEW8 1205 aa20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 E2F7Q96AV8 911 aa20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 PKMYT1Q99640 499 aa20.2■□□□□ 0.82
ATPAF2-201ENST00000444058 GOLGA6L4A6NEF3 574 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 GALR2O43603 387 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 CALUO43852 315 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 SOAT2O75908 522 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 CST3P01034 146 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 NR3C1P04150 777 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 PRR29P0C7W0 189 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 ATICP31939 592 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 STARD6P59095 220 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 NHLH1Q02575 133 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 PRKCQQ04759 706 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 TCF15Q12870 199 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 TEAD2Q15562 447 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 NFIL3Q16649 462 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 CFAP221Q4G0U5 840 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 FMR1NBQ8N0W7 255 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 GUF1Q8N442 669 aaKnown RBP20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 ZNF516Q92618 1163 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 FUBP3Q96I24 572 aaKnown RBP eCLIP20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 ZSWIM3Q96MP5 696 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 TMLHEQ9NVH6 421 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 ABI2Q9NYB9 513 aaPredicted RBP20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 ZMYM5Q9UJ78 669 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 CA14Q9ULX7 337 aa20.19■□□□□ 0.82
ATPAF2-201ENST00000444058 A0A1W2PRU2 124 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 NRG2O14511 850 aaPredicted RBP20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 MAPK13O15264 365 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 TACC1O75410 805 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 WARSP23381 471 aaKnown RBP20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 WEE1P30291 646 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 MAPRE1Q15691 268 aaKnown RBP20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 FAM171BQ6P995 826 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 GAREM2Q75VX8 874 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 OSTM1Q86WC4 334 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 ZSCAN18Q8TBC5 510 aaPredicted RBP20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 FAM200AQ8TCP9 573 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 KBTBD7Q8WVZ9 684 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 DNASE1L2Q92874 299 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 VRTNQ9H8Y1 702 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 TBC1D17Q9HA65 648 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 TRPV5Q9NQA5 729 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 CDH9Q9ULB4 789 aa20.18■□□□□ 0.82
ATPAF2-201ENST00000444058 SOBPA7XYQ1 873 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms