RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 SLC44A4Q53GD3 710 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 PHLDB3Q6NSJ2 640 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 POTEHQ6S545 545 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 LRRTM3Q86VH5 581 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 GOLGA5Q8TBA6 731 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 SHKBP1Q8TBC3 707 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 ZSCAN18Q8TBC5 510 aaPredicted RBP21.58■■□□□ 1.05
LRCH3-208ENST00000443727 SPPL2BQ8TCT7 592 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 PSMG2Q969U7 264 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 ZSWIM3Q96MP5 696 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 PLA2G2FQ9BZM2 168 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 FAM86C1Q9NVL1 165 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 GDAP2Q9NXN4 497 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 SIT1Q9Y3P8 196 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 PCDHB5Q9Y5E4 795 aa21.58■■□□□ 1.05
LRCH3-208ENST00000443727 PTPRJQ12913 1337 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 TSC2P49815 1807 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 NRG2O14511 850 aaPredicted RBP21.57■■□□□ 1.04
LRCH3-208ENST00000443727 EXOC3O60645 756 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 PRPF40AO75400 957 aaKnown RBP21.57■■□□□ 1.04
LRCH3-208ENST00000443727 MOSPD3O75425 235 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 MRE11P49959 708 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 CYP24A1Q07973 514 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 PSMD2Q13200 908 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 GRM2Q14416 872 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 MLF2Q15773 248 aaPredicted RBP21.57■■□□□ 1.04
LRCH3-208ENST00000443727 NFE2Q16621 373 aaPredicted RBP21.57■■□□□ 1.04
LRCH3-208ENST00000443727 KMT5BQ4FZB7 885 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 ARHGAP15Q53QZ3 475 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 SCARA3Q6AZY7 606 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 TMC8Q8IU68 726 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 CCDC105Q8IYK2 499 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 ADGRF2Q8IZF7 708 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 TOP6BLQ8N6T0 577 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 DTWD2Q8NBA8 298 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 CXorf38Q8TB03 319 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 CCDC47Q96A33 483 aaKnown RBP21.57■■□□□ 1.04
LRCH3-208ENST00000443727 GCNAQ96QF7 691 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 LPIN3Q9BQK8 851 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 ACBD6Q9BR61 282 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 TRMT61BQ9BVS5 477 aaKnown RBP21.57■■□□□ 1.04
LRCH3-208ENST00000443727 LRRC3Q9BY71 257 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 ATXN3LQ9H3M9 355 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 HPSEQ9Y251 543 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 TCHHQ07283 1943 aa21.57■■□□□ 1.04
LRCH3-208ENST00000443727 KLRC4O43908 158 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 MYL1P05976 194 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 HAPLN1P10915 354 aaPredicted RBP21.56■■□□□ 1.04
LRCH3-208ENST00000443727 FCARP24071 287 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 ACAT1P24752 427 aaKnown RBP21.56■■□□□ 1.04
LRCH3-208ENST00000443727 LHX1P48742 406 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 NDUFA8P51970 172 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 PRKCQQ04759 706 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 STK4Q13043 487 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 PSMD6Q15008 389 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 FSIP1Q8NA03 581 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 GIPC2Q8TF65 315 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 CGRRF1Q99675 332 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 FOXQ1Q9C009 403 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 BRD9Q9H8M2 597 aa21.56■■□□□ 1.04
LRCH3-208ENST00000443727 CACNA1HO95180 2353 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 GABRR2P28476 465 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 PCSK1P29120 753 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 VIPR2P41587 438 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 STARD6P59095 220 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 TRAPPC11Q7Z392 1133 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 C12orf56Q8IXR9 622 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 SPATA18Q8TC71 538 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 MMS19Q96T76 1030 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 PHOX2BQ99453 314 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 PI4K2AQ9BTU6 479 aa21.55■■□□□ 1.04
LRCH3-208ENST00000443727 ZNF334Q9HCZ1 680 aaPredicted RBP21.55■■□□□ 1.04
LRCH3-208ENST00000443727 RPN1P04843 607 aaKnown RBP21.54■■□□□ 1.04
LRCH3-208ENST00000443727 DCNP07585 359 aaKnown RBP21.54■■□□□ 1.04
LRCH3-208ENST00000443727 PSMC3P17980 439 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 ATF6P18850 670 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 UBXN2BQ14CS0 331 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 SOWAHAQ2M3V2 549 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 INTS6LQ5JSJ4 861 aaKnown RBP21.54■■□□□ 1.04
LRCH3-208ENST00000443727 DPH6Q7L8W6 267 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 YAF2Q8IY57 180 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 E2F7Q96AV8 911 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 TMLHEQ9NVH6 421 aa21.54■■□□□ 1.04
LRCH3-208ENST00000443727 A0A1W2PQ27 194 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 A0A1W2PQ64 194 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 A0A1W2PQD8 194 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 KANSL1LA0AUZ9 987 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 PHACTR2O75167 634 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 CLSTN1O94985 981 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 CDC25CP30307 473 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 GDI1P31150 447 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 TRPC3Q13507 836 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 STXBP5Q5T5C0 1151 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 GPR158Q5T848 1215 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 VITQ6UXI7 678 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 TPRG1Q6ZUI0 275 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 GAREM2Q75VX8 874 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 OSTM1Q86WC4 334 aa21.53■■□□□ 1.04
LRCH3-208ENST00000443727 SPATA2LQ8IUW3 424 aaPredicted RBP21.53■■□□□ 1.04
LRCH3-208ENST00000443727 KIAA0895Q8NCT3 520 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms