RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 HAPLN3Q96S86 360 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 WDCPQ9H6R7 721 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 KLC4Q9NSK0 619 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 LMBRD1Q9NUN5 540 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 FEZ2Q9UHY8 353 aaPredicted RBP5.83□□□□□ -1.48
VPS50-206ENST00000443443 AGAP1Q9UPQ3 857 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 PCDHA1Q9Y5I3 950 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 RAD54BQ9Y620 910 aa5.83□□□□□ -1.48
VPS50-206ENST00000443443 H3BUI4 141 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 C1QL1O75973 258 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 POU2F2P09086 479 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 NR2F6P10588 404 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 ITGALP20701 1170 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 HK3P52790 923 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 TXNRD1Q16881 649 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 PGS1Q32NB8 556 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 TMPRSS9Q7Z410 1059 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 CATIPQ7Z7H3 387 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 TMTC2Q8N394 836 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 PRR18Q8N4B5 295 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 PCSK9Q8NBP7 692 aaKnown RBP5.82□□□□□ -1.48
VPS50-206ENST00000443443 PCGF6Q9BYE7 350 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 GPR35Q9HC97 309 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 KMT5AQ9NQR1 393 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 AASDHPPTQ9NRN7 309 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 MRPS18AQ9NVS2 196 aaKnown RBP5.82□□□□□ -1.48
VPS50-206ENST00000443443 DDX56Q9NY93 547 aaKnown RBP5.82□□□□□ -1.48
VPS50-206ENST00000443443 ENTPD2Q9Y5L3 495 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 TNFRSF18Q9Y5U5 241 aa5.82□□□□□ -1.48
VPS50-206ENST00000443443 SPATA31A3Q5VYP0 1347 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 LINC00473A8K010 186 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 PRC1O43663 620 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 RHOP08100 348 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 ELFN1P0C7U0 828 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 MAP2K6P52564 334 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 EXOSC10Q01780 885 aaKnown RBP5.81□□□□□ -1.48
VPS50-206ENST00000443443 KIF22Q14807 665 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 COLEC12Q5KU26 742 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 FAM90A1Q86YD7 464 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 FMNL3Q8IVF7 1028 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 CHMP4CQ96CF2 233 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 NAP1L5Q96NT1 182 aaPredicted RBP5.81□□□□□ -1.48
VPS50-206ENST00000443443 ACTRT3Q9BYD9 372 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 AMBRA1Q9C0C7 1298 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 MRPL46Q9H2W6 279 aaKnown RBP5.81□□□□□ -1.48
VPS50-206ENST00000443443 PNPOQ9NVS9 261 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 GEMIN8Q9NWZ8 242 aaKnown RBP5.81□□□□□ -1.48
VPS50-206ENST00000443443 ETAA1Q9NY74 926 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 ARPP21Q9UBL0 812 aaPredicted RBP5.81□□□□□ -1.48
VPS50-206ENST00000443443 IP6K2Q9UHH9 426 aa5.81□□□□□ -1.48
VPS50-206ENST00000443443 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.81□□□□□ -1.48
VPS50-206ENST00000443443 ADGRA2Q96PE1 1338 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 VWC2LB2RUY7 222 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 M0QYG6 137 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 PROP1O75360 226 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 TTLL1O95922 423 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 AHSGP02765 367 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
VPS50-206ENST00000443443 PAX3P23760 479 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 FXR1P51114 621 aaKnown RBP eCLIP5.8□□□□□ -1.48
VPS50-206ENST00000443443 TBX4P57082 545 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 RHBDL3P58872 404 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 RBM20Q5T481 1227 aaKnown RBP5.8□□□□□ -1.48
VPS50-206ENST00000443443 AMIGO2Q86SJ2 522 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 RASAL3Q86YV0 1011 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 JDP2Q8WYK2 163 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 DDX17Q92841 729 aaKnown RBP5.8□□□□□ -1.48
VPS50-206ENST00000443443 FKBP10Q96AY3 582 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 TIMP4Q99727 224 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 TINAGL1Q9GZM7 467 aaPredicted RBP5.8□□□□□ -1.48
VPS50-206ENST00000443443 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.8□□□□□ -1.48
VPS50-206ENST00000443443 ZDHHC8Q9ULC8 765 aa5.8□□□□□ -1.48
VPS50-206ENST00000443443 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.8□□□□□ -1.48
VPS50-206ENST00000443443 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 SOAT2O75908 522 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 CDK4P11802 303 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 TYRP14679 529 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 CD6P30203 668 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 NHLH1Q02575 133 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 TBCCQ15814 346 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 PPP1R3BQ86XI6 285 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 NME8Q8N427 588 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 CAMKK1Q8N5S9 505 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 FAM46DQ8NEK8 389 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 PNISRQ8TF01 805 aaKnown RBP5.79□□□□□ -1.48
VPS50-206ENST00000443443 RPS6KC1Q96S38 1066 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 GTPBP4Q9BZE4 634 aaKnown RBP5.79□□□□□ -1.48
VPS50-206ENST00000443443 WNT6Q9Y6F9 365 aa5.79□□□□□ -1.48
VPS50-206ENST00000443443 RBMXL2O75526 392 aaKnown RBP5.78□□□□□ -1.48
VPS50-206ENST00000443443 URI1O94763 535 aaPredicted RBP5.78□□□□□ -1.48
VPS50-206ENST00000443443 ZFXP17010 805 aaPredicted RBP5.78□□□□□ -1.48
VPS50-206ENST00000443443 VCAM1P19320 739 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 GCLCP48506 637 aaPredicted RBP5.78□□□□□ -1.48
VPS50-206ENST00000443443 KCNJ5P48544 419 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 EXOSC9Q06265 439 aaKnown RBP5.78□□□□□ -1.48
VPS50-206ENST00000443443 EIF2B5Q13144 721 aaKnown RBP5.78□□□□□ -1.48
VPS50-206ENST00000443443 OS9Q13438 667 aaPredicted RBP5.78□□□□□ -1.48
VPS50-206ENST00000443443 C4orf46Q504U0 113 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 PLAC9Q5JTB6 97 aa5.78□□□□□ -1.48
VPS50-206ENST00000443443 TMEM240Q5SV17 173 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms