RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ZNF668Q96K58 619 aaPredicted RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 PPP1R10Q96QC0 940 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 MRPL1Q9BYD6 325 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 GRIP2Q9C0E4 1043 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ANKRD2Q9GZV1 360 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 Q9H521 79 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 RXFP1Q9HBX9 757 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 MLXIPLQ9NP71 852 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 CABP5Q9NP86 173 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 PCDH12Q9NPG4 1184 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ANLNQ9NQW6 1124 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 ARHGEF3Q9NR81 526 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 SAMSN1Q9NSI8 373 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 DNAJC17Q9NVM6 304 aaKnown RBP2.92□□□□□ -1.94
LIG4-203ENST00000442234 RRN3Q9NYV6 651 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 SMARCAL1Q9NZC9 954 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 FAM153AQ9UHL3 310 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 SLC8A2Q9UPR5 921 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 TULP4Q9NRJ4 1543 aa2.92□□□□□ -1.94
LIG4-203ENST00000442234 RFX7Q2KHR2 1363 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 A0A1W2PQ27 194 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 A0A1W2PQ64 194 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 A0A1W2PQD8 194 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 A0A1W2PRG0 241 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 A8MX80 341 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 INO80B-WBP1J3KQ70 363 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MAPK13O15264 365 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GYG2O15488 501 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SNX3O60493 162 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TRMUO75648 421 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 OR6B1O95007 311 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 UNC5CO95185 931 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TFPTP0C1Z6 253 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 UBTFL1P0CB47 393 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 CDK4P11802 303 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 P4HA1P13674 534 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CPA3P15088 417 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MYOGP15173 224 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ATF4P18848 351 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 HSD17B3P37058 310 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SLCO1A2P46721 670 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PLCD1P51178 756 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CASP5P51878 434 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GTF2A2P52657 109 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 THOP1P52888 689 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 C21orf59P57076 290 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MCCD1P59942 119 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 EIF4A1P60842 406 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 PRR20EP86478 221 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PRR20CP86479 221 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PRR20DP86480 221 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PRR20BP86481 221 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PRR20AP86496 221 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 OCRLQ01968 901 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 UBXN1Q04323 297 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SPAG1Q07617 926 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZNF423Q2M1K9 1284 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GNASQ5JWF2 1037 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TTC39AQ5SRH9 613 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ERMARDQ5T6L9 678 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SH3BP5LQ7L8J4 393 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 TMC4Q7Z404 712 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PEX26Q7Z412 305 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PASD1Q8IV76 773 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 NOSTRINQ8IVI9 506 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 CD302Q8IX05 232 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZBED8Q8IZ13 594 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SLC22A8Q8TCC7 542 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SLC7A3Q8WY07 619 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 EME1Q96AY2 570 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 RMDN1Q96DB5 314 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MED30Q96HR3 178 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SCLYQ96I15 445 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SHCBP1LQ9BZQ2 653 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 MTMR12Q9C0I1 747 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 VPS37BQ9H9H4 285 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PLEKHA5Q9HAU0 1116 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 KIAA1586Q9HCI6 787 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 FARSBQ9NSD9 589 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 EHD2Q9NZN4 543 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SLC12A6Q9UHW9 1150 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 RBM8AQ9Y5S9 174 aaKnown RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 SLC12A7Q9Y666 1083 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZMYM6O95789 1325 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 DNAH12Q6ZR08 3092 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 NEXMIFQ5QGS0 1516 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ITPR3Q14573 2671 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 THSD7BQ9C0I4 1608 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GOLGA8QA0A0J9YX86 632 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 hCG_1642624A0A1W2PR95 340 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 KANSL1LA0AUZ9 987 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 SH3PXD2BA1X283 911 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 FUOMA2VDF0 154 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GOLGA8OA6NCC3 632 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 ZSCAN5CA6NGD5 496 aaPredicted RBP2.91□□□□□ -1.94
LIG4-203ENST00000442234 GOLGA8NF8WBI6 632 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 STMND1H3BQB6 276 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 GOLGA8RI6L899 631 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 O00370 1275 aa2.91□□□□□ -1.94
LIG4-203ENST00000442234 PDE2AO00408 941 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms