RNA–Protein interactions for RNA: ENST00000442010.2

HMGB3P22-201, Transcript of high mobility group box 3 pseudogene 22, humanhuman

TSL 2 BASIC

Gene HMGB3P22, Length 597 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-201ENST00000442010 SMARCD2Q92925 531 aa20.35■□□□□ 0.85
HMGB3P22-201ENST00000442010 PKMYT1Q99640 499 aa20.35■□□□□ 0.85
HMGB3P22-201ENST00000442010 DDX23Q9BUQ8 820 aaKnown RBP20.35■□□□□ 0.85
HMGB3P22-201ENST00000442010 TRPV4Q9HBA0 871 aa20.35■□□□□ 0.85
HMGB3P22-201ENST00000442010 TMLHEQ9NVH6 421 aa20.35■□□□□ 0.85
HMGB3P22-201ENST00000442010 CGNQ9P2M7 1197 aaKnown RBP20.35■□□□□ 0.85
HMGB3P22-201ENST00000442010 H0Y858 1186 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 TULP1O00294 542 aaPredicted RBP20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 GABRDO14764 452 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 HAPLN1P10915 354 aaPredicted RBP20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 CYP2J2P51589 502 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 CDR1P51861 262 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 CYP24A1Q07973 514 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 PSMD6Q15008 389 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 DUOXA2Q1HG44 320 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 KMT5BQ4FZB7 885 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 GAREM2Q75VX8 874 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 HS2ST1Q7LGA3 356 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 ALYREFQ86V81 257 aaKnown RBP20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 OSTM1Q86WC4 334 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 RDH13Q8NBN7 331 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 LPIN3Q9BQK8 851 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 ACBD6Q9BR61 282 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 MKNK1Q9BUB5 465 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 ZFP14Q9HCL3 533 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 DDX43Q9NXZ2 648 aaKnown RBP20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 DLGAP2Q9P1A6 1054 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 ATP6V1DQ9Y5K8 247 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 SNX9Q9Y5X1 595 aa20.34■□□□□ 0.85
HMGB3P22-201ENST00000442010 ANAPC1Q9H1A4 1944 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 NCANO14594 1321 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 FANCMQ8IYD8 2048 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 DMDP11532 3685 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 A0A1W2PQ27 194 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 A0A1W2PQ64 194 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 A0A1W2PQD8 194 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 A0A1W2PRU2 124 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 HUS1O60921 280 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 TNNC2P02585 160 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 MYL1P05976 194 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 NDUFA8P51970 172 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 PFKPQ01813 784 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 PSMD2Q13200 908 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 SNW1Q13573 536 aaKnown RBP20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 SOWAHAQ2M3V2 549 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 MGAT5BQ3V5L5 792 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 SLC44A4Q53GD3 710 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 DCP1BQ8IZD4 617 aaKnown RBP20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 TMEM174Q8WUU8 243 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 CGRRF1Q99675 332 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 SEPT5Q99719 369 aaPredicted RBP20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 GPR88Q9GZN0 384 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 SCAND2PQ9GZW5 306 aaPredicted RBP20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 IRF2BPLQ9H1B7 796 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 IL21Q9HBE4 155 aa20.33■□□□□ 0.85
HMGB3P22-201ENST00000442010 KIF26AQ9ULI4 1882 aaPredicted RBP20.33■□□□□ 0.84
HMGB3P22-201ENST00000442010 PATJQ8NI35 1801 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 USP34Q70CQ2 3546 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 SYKP43405 635 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 MRE11P49959 708 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 TSPY1Q01534 308 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 PRKCQQ04759 706 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 MLF2Q15773 248 aaPredicted RBP20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 INTS6LQ5JSJ4 861 aaKnown RBP20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 VITQ6UXI7 678 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 DPH6Q7L8W6 267 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 TRAPPC11Q7Z392 1133 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 ITIH5Q86UX2 942 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 DTWD2Q8NBA8 298 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 ZSCAN18Q8TBC5 510 aaPredicted RBP20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 ZNF516Q92618 1163 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 HPDLQ96IR7 371 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 KCTD10Q9H3F6 313 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 DMAC2Q9NW81 257 aa20.32■□□□□ 0.84
HMGB3P22-201ENST00000442010 SHISA7A6NL88 538 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 HCRTO43612 131 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 CST3P01034 146 aaPredicted RBP20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 DLATP10515 647 aaKnown RBP20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 ACAT1P24752 427 aaKnown RBP20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 VIPR2P41587 438 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 LHX1P48742 406 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 MYO1EQ12965 1108 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 GRM2Q14416 872 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 STXBP5Q5T5C0 1151 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 ADGRF2Q8IZF7 708 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 PLEKHO2Q8TD55 490 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 KBTBD7Q8WVZ9 684 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 SHDQ96IW2 340 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 FOXQ1Q9C009 403 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 GOLPH3LQ9H4A5 285 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 EXOC1Q9NV70 894 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 FAM86C1Q9NVL1 165 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 ABI2Q9NYB9 513 aaPredicted RBP20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 SIT1Q9Y3P8 196 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 PCDHB5Q9Y5E4 795 aa20.31■□□□□ 0.84
HMGB3P22-201ENST00000442010 KANSL1LA0AUZ9 987 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 STK25O00506 426 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 PRPF40AO75400 957 aaKnown RBP20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 PRR29P0C7W0 189 aa20.3■□□□□ 0.84
HMGB3P22-201ENST00000442010 GLULP15104 373 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms