RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 STRA6Q9BX79 667 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 TOPORSQ9NS56 1045 aaPredicted RBP21.36■■□□□ 1.01
SHOX2-203ENST00000441443 SSTR3P32745 418 aaPredicted RBP21.36■■□□□ 1.01
SHOX2-203ENST00000441443 RTP1P59025 263 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 CCDC62Q6P9F0 684 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 MCOLN2Q8IZK6 566 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 HAUS1Q96CS2 278 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 TSSK1BQ9BXA7 367 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 FAM192AQ9GZU8 254 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 KCNK13Q9HB14 408 aa21.36■■□□□ 1.01
SHOX2-203ENST00000441443 GAS7O60861 476 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 PSMD10O75832 226 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 SSTR1P30872 391 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 LTBP1Q14766 1721 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 MDH1BQ5I0G3 518 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 CBWD2Q8IUF1 395 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 ASCC2Q9H1I8 757 aaPredicted RBP21.35■■□□□ 1.01
SHOX2-203ENST00000441443 LMCD1Q9NZU5 365 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 CYP3A4P08684 503 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 FLAD1Q8NFF5 587 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 SKA1Q96BD8 255 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 CLPTM1LQ96KA5 538 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 TTC1Q99614 292 aa21.35■■□□□ 1.01
SHOX2-203ENST00000441443 DDX39AO00148 427 aaKnown RBP21.34■■□□□ 1.01
SHOX2-203ENST00000441443 BAG2O95816 211 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 SLC1A1P43005 524 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 GAD2Q05329 585 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 TFDP1Q14186 410 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 TAB3Q8N5C8 712 aaPredicted RBP21.34■■□□□ 1.01
SHOX2-203ENST00000441443 LXNQ9BS40 222 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 PI4K2AQ9BTU6 479 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 SPATA16Q9BXB7 569 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 ZNF277Q9NRM2 450 aaPredicted RBP21.34■■□□□ 1.01
SHOX2-203ENST00000441443 USP1O94782 785 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 PRELPP51888 382 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 GPX6P59796 221 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 CDK16Q00536 496 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 TAS1R2Q8TE23 839 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 AZIN2Q96A70 460 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 FBXO28Q9NVF7 368 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 IFNB1P01574 187 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 ATF7P17544 494 aaPredicted RBP21.34■■□□□ 1.01
SHOX2-203ENST00000441443 STAT2P52630 851 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 TUBB6Q9BUF5 446 aa21.34■■□□□ 1.01
SHOX2-203ENST00000441443 SLX4Q8IY92 1834 aa21.33■■□□□ 1.01
SHOX2-203ENST00000441443 B2RBV5 119 aa21.33■■□□□ 1.01
SHOX2-203ENST00000441443 H3BRJ5 948 aa21.33■■□□□ 1.01
SHOX2-203ENST00000441443 RARBP10826 455 aa21.33■■□□□ 1.01
SHOX2-203ENST00000441443 ZC3H12AQ5D1E8 599 aaKnown RBP21.33■■□□□ 1.01
SHOX2-203ENST00000441443 ALYREFQ86V81 257 aaKnown RBP21.33■■□□□ 1.01
SHOX2-203ENST00000441443 NMUR2Q9GZQ4 415 aa21.33■■□□□ 1.01
SHOX2-203ENST00000441443 UNC45AQ9H3U1 944 aa21.33■■□□□ 1.01
SHOX2-203ENST00000441443 UMODL1Q5DID0 1318 aa21.33■■□□□ 1.01
SHOX2-203ENST00000441443 ZNFX1Q9P2E3 1918 aaKnown RBP21.33■■□□□ 1
SHOX2-203ENST00000441443 FOCADQ5VW36 1801 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 LRRC37AA6NMS7 1700 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 FCHO1O14526 889 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 MYL2P10916 166 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 PYGBP11216 843 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 GEMIN4P57678 1058 aaKnown RBP21.33■■□□□ 1
SHOX2-203ENST00000441443 PADI6Q6TGC4 694 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 RHOT1Q8IXI2 618 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 LARGE2Q8N3Y3 721 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 FOXP3Q9BZS1 431 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 TMEM39BQ9GZU3 492 aa21.33■■□□□ 1
SHOX2-203ENST00000441443 PROSCO94903 275 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 SPATA31D3P0C874 917 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 ANPEPP15144 967 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 ARL4CP56559 192 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 GSTA3Q16772 222 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 CEP128Q6ZU80 1094 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 SPATA31D4Q6ZUB0 917 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 CFAP61Q8NHU2 1237 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 FNBP1Q96RU3 617 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 SLC24A2Q9UI40 661 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 FAM237BA0A1B0GVD1 139 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 ALOX15BO15296 676 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 LIASO43766 372 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 UNGP13051 313 aaPredicted RBP21.32■■□□□ 1
SHOX2-203ENST00000441443 EN1Q05925 392 aaPredicted RBP21.32■■□□□ 1
SHOX2-203ENST00000441443 MYBPC2Q14324 1141 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 DLGAP5Q15398 846 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 SLC25A41Q8N5S1 370 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 TTC17Q96AE7 1141 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 OPTNQ96CV9 577 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 NT5C1BQ96P26 610 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 NR1H4Q96RI1 486 aaPredicted RBP21.32■■□□□ 1
SHOX2-203ENST00000441443 GLIS2Q9BZE0 524 aaPredicted RBP21.32■■□□□ 1
SHOX2-203ENST00000441443 TMEM206Q9H813 350 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 ARHGEF4Q9NR80 690 aa21.32■■□□□ 1
SHOX2-203ENST00000441443 ENO1P06733 434 aaKnown RBP21.31■■□□□ 1
SHOX2-203ENST00000441443 DSG1Q02413 1049 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 CFAP157Q5JU67 520 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 CENPUQ71F23 418 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.31■■□□□ 1
SHOX2-203ENST00000441443 PASD1Q8IV76 773 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 ACCSQ96QU6 501 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 RABGEF1Q9UJ41 708 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 ANGPTL2Q9UKU9 493 aa21.31■■□□□ 1
SHOX2-203ENST00000441443 DLDP09622 509 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms