RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 OXCT2Q9BYC2 517 aaPredicted RBP5.33□□□□□ -1.56
CCDC140-202ENST00000440903 NUCKS1Q9H1E3 243 aaKnown RBP5.33□□□□□ -1.56
CCDC140-202ENST00000440903 RBSNQ9H1K0 784 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 SNX25Q9H3E2 840 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 GOLGA2P5Q9HBQ8 144 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 ENTPD7Q9NQZ7 604 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 CXXC1Q9P0U4 656 aaPredicted RBP5.33□□□□□ -1.56
CCDC140-202ENST00000440903 APEX2Q9UBZ4 518 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 ADAM28Q9UKQ2 775 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 SNX9Q9Y5X1 595 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 MRPL42Q9Y6G3 142 aaKnown RBP5.33□□□□□ -1.56
CCDC140-202ENST00000440903 CITO14578 2027 aa5.33□□□□□ -1.56
CCDC140-202ENST00000440903 PTPRJQ12913 1337 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ITIH6Q6UXX5 1313 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 LINC01553A4QN01 128 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 MEIS3P2A8K0S8 358 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 KPNA7A9QM74 516 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 NRP1O14786 923 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 F12P00748 615 aaPredicted RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ASS1P00966 412 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 C4BPAP04003 597 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CA3P07451 260 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 GALTP07902 379 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 SRGAP2BP0DMP2 458 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 KRT5P13647 590 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CPB1P15086 417 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 PCSK1P29120 753 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 LHX1P48742 406 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 SLC11A1P49279 550 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 GLUD2P49448 558 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 PDE6CP51160 858 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 GUCY2FP51841 1108 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 SLC8A3P57103 927 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 MYL6P60660 151 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 GCNT1Q02742 428 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 YWHAHQ04917 246 aaPredicted RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 LRMPQ12912 555 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CUL2Q13617 745 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 RAPGEF1Q13905 1077 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 MAPRE1Q15691 268 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ZBTB6Q15916 424 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 UPP1Q16831 310 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 USP41Q3LFD5 358 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 WDR72Q3MJ13 1102 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CBWD6Q4V339 395 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 EPC2Q52LR7 807 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CBWD3Q5JTY5 395 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CBWD5Q5RIA9 395 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 SPECC1LQ69YQ0 1117 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 PDE12Q6L8Q7 609 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 TRIM65Q6PJ69 517 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ANKS3Q6ZW76 656 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 VPS36Q86VN1 386 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 IRF2BP1Q8IU81 584 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CNGA4Q8IV77 575 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 COLGALT2Q8IYK4 626 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ADGRF2Q8IZF7 708 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 SLC39A11Q8N1S5 342 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 Q8N3U1 123 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ZSWIM2Q8NEG5 633 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 HASPINQ8TF76 798 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 JAKMIP2Q96AA8 810 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 TIFAQ96CG3 184 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ZNF689Q96CS4 500 aaPredicted RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 BORCS6Q96GS4 357 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 MRFAP1L1Q96HT8 127 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 TNIP3Q96KP6 325 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 MED15Q96RN5 788 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ERGIC2Q96RQ1 377 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 POP1Q99575 1024 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CRACR2AQ9BSW2 395 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 HERC2P3Q9BVR0 1158 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 EMILIN2Q9BXX0 1053 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 XPO4Q9C0E2 1151 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 LMAN2LQ9H0V9 348 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 PDCL3Q9H2J4 239 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 NRDE2Q9H7Z3 1164 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 VRTNQ9H8Y1 702 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CYP3A43Q9HB55 503 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 RC3H2Q9HBD1 1191 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 PLCB1Q9NQ66 1216 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 MRPL17Q9NRX2 175 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 FAM207AQ9NSI2 230 aaPredicted RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 RNF19AQ9NV58 838 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 ZNHIT6Q9NWK9 470 aaKnown RBP5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CEP72Q9P209 647 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 DPP7Q9UHL4 492 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 COQ4Q9Y3A0 265 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 MAP4K5Q9Y4K4 846 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 CEP83Q9Y592 693 aa5.32□□□□□ -1.56
CCDC140-202ENST00000440903 TDRD15B5MCY1 1934 aaKnown RBP5.31□□□□□ -1.56
CCDC140-202ENST00000440903 ANO9A1A5B4 782 aa5.31□□□□□ -1.56
CCDC140-202ENST00000440903 OR6C75A6NL08 312 aa5.31□□□□□ -1.56
CCDC140-202ENST00000440903 A8MXQ7 604 aa5.31□□□□□ -1.56
CCDC140-202ENST00000440903 PIRO00625 290 aa5.31□□□□□ -1.56
CCDC140-202ENST00000440903 CYB561D2O14569 222 aa5.31□□□□□ -1.56
CCDC140-202ENST00000440903 TACC1O75410 805 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms