RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 RAP1GAPP47736 663 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 MCCD1P59942 119 aaPredicted RBP19.32■□□□□ 0.68
CPSF4-205ENST00000440514 TSPY1Q01534 308 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 DUSP4Q13115 394 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 ZNF667Q5HYK9 610 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 INTS6LQ5JSJ4 861 aaKnown RBP19.32■□□□□ 0.68
CPSF4-205ENST00000440514 CYP26C1Q6V0L0 522 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 GRASPQ7Z6J2 395 aaPredicted RBP19.32■□□□□ 0.68
CPSF4-205ENST00000440514 GJD3Q8N144 294 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 MLKLQ8NB16 471 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 SPATA18Q8TC71 538 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 RWDD2AQ9UIY3 292 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 SLC27A5Q9Y2P5 690 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 NME7Q9Y5B8 376 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 C5orf42Q9H799 3197 aa19.32■□□□□ 0.68
CPSF4-205ENST00000440514 C2CD4DB7Z1M9 353 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 LOC730098B7Z3J9 87 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 DLL1O00548 723 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 LRRN2O75325 713 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 ASS1P00966 412 aaKnown RBP19.31■□□□□ 0.68
CPSF4-205ENST00000440514 POU2F2P09086 479 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 PTMSP20962 102 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 LMO2P25791 158 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 LHX1P48742 406 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 NLRP12P59046 1061 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 PSMC1P62191 440 aaKnown RBP19.31■□□□□ 0.68
CPSF4-205ENST00000440514 TWF1Q12792 350 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 KRT39Q6A163 491 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 FILIP1Q7Z7B0 1213 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 DCP1BQ8IZD4 617 aaKnown RBP19.31■□□□□ 0.68
CPSF4-205ENST00000440514 SLC35C1Q96A29 364 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 PKMYT1Q99640 499 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 SYT15Q9BQS2 421 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 ACBD6Q9BR61 282 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 SDCBP2Q9H190 292 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 WDR6Q9NNW5 1121 aaKnown RBP19.31■□□□□ 0.68
CPSF4-205ENST00000440514 ABI2Q9NYB9 513 aaPredicted RBP19.31■□□□□ 0.68
CPSF4-205ENST00000440514 MAFFQ9ULX9 164 aa19.31■□□□□ 0.68
CPSF4-205ENST00000440514 DOCK6Q96HP0 2047 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 STX10O60499 249 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 ATP2C2O75185 946 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 TACC1O75410 805 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 PCSK1P29120 753 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 GTF2H1P32780 548 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 CDH8P55286 799 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 SGSM1Q2NKQ1 1148 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 CBWD6Q4V339 395 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 CBWD3Q5JTY5 395 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 CBWD5Q5RIA9 395 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 RBM43Q6ZSC3 357 aaKnown RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 RTL10Q7L3V2 364 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 GET4Q7L5D6 327 aaPredicted RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 FRMD5Q7Z6J6 570 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 TDRD5Q8NAT2 981 aaKnown RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 OR6B3Q8NGW1 331 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 TAF4BQ92750 862 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 SEMA4DQ92854 862 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 SEPT5Q99719 369 aaPredicted RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 SRRTQ9BXP5 876 aaKnown RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 SNX25Q9H3E2 840 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 APOBEC3GQ9HC16 384 aaKnown RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 METTL14Q9HCE5 456 aaKnown RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 CEP72Q9P209 647 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 DNMT3BQ9UBC3 853 aaKnown RBP19.3■□□□□ 0.68
CPSF4-205ENST00000440514 GTF3C4Q9UKN8 822 aa19.3■□□□□ 0.68
CPSF4-205ENST00000440514 N4BP1O75113 896 aaKnown RBP19.29■□□□□ 0.68
CPSF4-205ENST00000440514 PDGFRBP09619 1106 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 ASPAP45381 313 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 NOP14P78316 857 aaKnown RBP19.29■□□□□ 0.68
CPSF4-205ENST00000440514 LPIN3Q9BQK8 851 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 IMPG2Q9BZV3 1241 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 DPEP3Q9H4B8 488 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 CRTAC1Q9NQ79 661 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 PCDHB5Q9Y5E4 795 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 NOTCH4Q99466 2003 aa19.29■□□□□ 0.68
CPSF4-205ENST00000440514 MYBPHLA2RUH7 354 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 TNFRSF10AO00220 468 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 MGAT5BQ3V5L5 792 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 PABPC1LQ4VXU2 614 aaKnown RBP19.28■□□□□ 0.68
CPSF4-205ENST00000440514 CCDC183Q5T5S1 534 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 FBXL13Q8NEE6 735 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 SPPL2BQ8TCT7 592 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 C2orf15Q8WU43 125 aaKnown RBP19.28■□□□□ 0.68
CPSF4-205ENST00000440514 KHSRPQ92945 711 aaKnown RBP eCLIP19.28■□□□□ 0.68
CPSF4-205ENST00000440514 MYLPFQ96A32 169 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 CORO1BQ9BR76 489 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 DNAJC25Q9H1X3 360 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 CDH9Q9ULB4 789 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 NR2E1Q9Y466 385 aa19.28■□□□□ 0.68
CPSF4-205ENST00000440514 A8MXQ7 604 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 RHOP08100 348 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 P4HA1P13674 534 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 ATF6P18850 670 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 FSHRP23945 695 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 GBP2P32456 591 aaPredicted RBP19.27■□□□□ 0.68
CPSF4-205ENST00000440514 GNL1P36915 607 aaPredicted RBP19.27■□□□□ 0.68
CPSF4-205ENST00000440514 SMARCB1Q12824 385 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 PLD1Q13393 1074 aa19.27■□□□□ 0.68
CPSF4-205ENST00000440514 NFE2Q16621 373 aaPredicted RBP19.27■□□□□ 0.68
CPSF4-205ENST00000440514 SLC5A9Q2M3M2 681 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms