RNA–Protein interactions for RNA: ENST00000440400.1

ACTN4-204, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 3,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-204ENST00000440400 GCKP35557 465 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 MARCKSL1P49006 195 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 PDCLQ13371 301 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 CUL1Q13616 776 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 SNX17Q15036 470 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 ZNF667Q5HYK9 610 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 ARMC3Q5W041 872 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 CASKIN2Q8WXE0 1202 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 DDX27Q96GQ7 796 aaKnown RBP13.96□□□□□ -0.17
ACTN4-204ENST00000440400 AP5M1Q9H0R1 490 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 PARVAQ9NVD7 372 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 C17orf102A2RUQ5 167 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 TMEM191CA6NGB0 347 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 FSCN2O14926 492 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 AP1G2O75843 785 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 RPLP2P05387 115 aaKnown RBP13.96□□□□□ -0.17
ACTN4-204ENST00000440400 DRG2P55039 364 aaKnown RBP13.96□□□□□ -0.17
ACTN4-204ENST00000440400 FCGRTP55899 365 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 RBP5P82980 135 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 DHX34Q14147 1143 aaKnown RBP13.96□□□□□ -0.17
ACTN4-204ENST00000440400 CDR2LQ86X02 465 aaPredicted RBP13.96□□□□□ -0.17
ACTN4-204ENST00000440400 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.17
ACTN4-204ENST00000440400 RUNDC3BQ96NL0 473 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 KIF9Q9HAQ2 790 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 DPP3Q9NY33 737 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 DDX20Q9UHI6 824 aaKnown RBP13.96□□□□□ -0.17
ACTN4-204ENST00000440400 KIAA1257Q9ULG3 409 aa13.96□□□□□ -0.17
ACTN4-204ENST00000440400 TRIP11Q15643 1979 aa13.96□□□□□ -0.18
ACTN4-204ENST00000440400 KRIT1O00522 736 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 TNPO2O14787 897 aaKnown RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 EIF3HO15372 352 aaKnown RBP eCLIP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 MED7O43513 233 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 SHOX2O60902 331 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ITGB3P05106 788 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 GNAT1P11488 350 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ITGA4P13612 1032 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 CYP3A5P20815 502 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 PTGIRP43119 386 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ATP1A2P50993 1020 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 MESDQ14696 234 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 LRRC38Q5VT99 294 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 CCSAPQ6IQ19 270 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ZDHHC14Q8IZN3 488 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 FAM187AA6NFU0 413 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 AGPSO00116 658 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 SART1O43290 800 aaKnown RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 PHF2O75151 1096 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 HEXIM1O94992 359 aaKnown RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 FGGP02679 453 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 CYP2B6P20813 491 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 LACTBP83111 547 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 MGAT3Q09327 533 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 KIZQ2M2Z5 673 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 KATNAL2Q8IYT4 538 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 TMEM35BQ8NCS4 154 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 TMEM40Q8WWA1 233 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ELOVL4Q9GZR5 314 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ADAM22Q9P0K1 906 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 TRIP12Q14669 1992 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 KIF3CO14782 793 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 P4HA1P13674 534 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 RWDD2BP57060 319 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ZNF252P-AS1Q0IIN9 211 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 TAF2Q6P1X5 1199 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 C3orf20Q8ND61 904 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 KLHDC9Q8NEP7 349 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 FEZF2Q8TBJ5 459 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 FNIP1Q8TF40 1166 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 TRIB2Q92519 343 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 BTBD6Q96KE9 485 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 MTG1Q9BT17 334 aaPredicted RBP13.95□□□□□ -0.18
ACTN4-204ENST00000440400 SMYD3Q9H7B4 428 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 ANAPC7Q9UJX3 599 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 GRIN2DO15399 1336 aa13.95□□□□□ -0.18
ACTN4-204ENST00000440400 TREHO43280 583 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 ADAMTS4O75173 837 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 CSDE1O75534 798 aaKnown RBP13.94□□□□□ -0.18
ACTN4-204ENST00000440400 NPTXRO95502 500 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 FAM163BP0C2L3 166 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 PYGMP11217 842 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 OSTNP61366 133 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 MRPS25P82663 173 aaKnown RBP13.94□□□□□ -0.18
ACTN4-204ENST00000440400 SLC7A5Q01650 507 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 PAK2Q13177 524 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 CPNE8Q86YQ8 564 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 SLC13A5Q86YT5 568 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-204ENST00000440400 EIF2AQ9BY44 585 aaKnown RBP13.94□□□□□ -0.18
ACTN4-204ENST00000440400 LRRC19Q9H756 370 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 ERVK-5Q9HDB9 667 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 NR2E1Q9Y466 385 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 KLHL33A6NCF5 533 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 MYADML2A6NDP7 307 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 HMGCRP04035 888 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 CHRNA3P32297 505 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 RPL34P49207 117 aaKnown RBP13.94□□□□□ -0.18
ACTN4-204ENST00000440400 KLF1Q13351 362 aaPredicted RBP13.94□□□□□ -0.18
ACTN4-204ENST00000440400 SNX1Q13596 522 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 PKDCCQ504Y2 493 aa13.94□□□□□ -0.18
ACTN4-204ENST00000440400 SPDYCQ5MJ68 293 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms