RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 ALG13Q9NP73 1137 aaKnown RBP14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 STYXL1Q9Y6J8 313 aa14.3□□□□□ -0.12
HERPUD1-204ENST00000439977 KRT19P08727 400 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 CD48P09326 243 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 ARL2P36404 184 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 GSCP56915 257 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 TGFB2P61812 414 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 GALNTL6Q49A17 601 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 ANKRD22Q5VYY1 191 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 SLFN12LQ6IEE8 588 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 XRRA1Q6P2D8 792 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 TRIM72Q6ZMU5 477 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 CFAP57Q96MR6 1250 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 TACO1Q9BSH4 297 aaKnown RBP14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 LGALS13Q9UHV8 139 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 MAFBQ9Y5Q3 323 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 IL9RQ01113 521 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 SLC1A5Q15758 541 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 STXBP2Q15833 593 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 TRABD2AQ86V40 505 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 ERICH1Q86X53 443 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 ALLCQ8N6M5 410 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 BBOF1Q8ND07 529 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 JOSD2Q8TAC2 188 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 CDHR1Q96JP9 859 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 PPP1R16BQ96T49 567 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 MYCBPQ99417 103 aaPredicted RBP14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 PCYT2Q99447 389 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 R3HDMLQ9H3Y0 253 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 PRKAG3Q9UGI9 489 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 POLIQ9UNA4 740 aa14.29□□□□□ -0.12
HERPUD1-204ENST00000439977 H0YCG3 227 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TBXAS1P24557 533 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 RNASELQ05823 741 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 NEDD9Q14511 834 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TAF5Q15542 800 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 MSS51Q4VC12 460 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 ANGEL2Q5VTE6 544 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 RBM41Q96IZ5 413 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 CXorf56Q9H5V9 222 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 ETNK1Q9HBU6 452 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 RXFP1Q9HBX9 757 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 EURLQ9NYK6 297 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 ADGRA2Q96PE1 1338 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 hCG_1818297A0A087WSY0 165 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TCEA3O75764 348 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TARSP26639 723 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 CDC25CP30307 473 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TRPC3Q13507 836 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TFDP1Q14186 410 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 MTFR1Q15390 333 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 LY6KQ17RY6 165 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TMEM132AQ24JP5 1023 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 EAPPQ56P03 285 aaPredicted RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 WLSQ5T9L3 541 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 DENND1BQ6P3S1 775 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 KIAA0319LQ8IZA0 1049 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 RNF149Q8NC42 400 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TRAPPC12Q8WVT3 735 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 ERP27Q96DN0 273 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 VCPIP1Q96JH7 1222 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 MAK16Q9BXY0 300 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 MCM8Q9UJA3 840 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 PHTF1Q9UMS5 762 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TCRBV7S3A2A0A539 114 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 CST8O60676 142 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 LDHAP00338 332 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 ASS1P00966 412 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 FGFR1P11362 822 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 KRT4P19013 534 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 PSMA2P25787 234 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 IL1R2P27930 398 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 CDKN2BP42772 138 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TFDP3Q5H9I0 405 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 ZNF449Q6P9G9 518 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 PPP1R21Q6ZMI0 780 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 TMEM35BQ8NCS4 154 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 ACTL9Q8TC94 416 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 SMC6Q96SB8 1091 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 AFG3L2Q9Y4W6 797 aa14.28□□□□□ -0.12
HERPUD1-204ENST00000439977 NFASCO94856 1347 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 ASMTLO95671 621 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 STAT5BP51692 787 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 OTUD4Q01804 1114 aaKnown RBP14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 FNBP1LQ5T0N5 605 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 DEFB132Q7Z7B7 95 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 LRRN4Q8WUT4 740 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 MYLK2Q9H1R3 596 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 CYTH4Q9UIA0 394 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 LOXHD1Q8IVV2 1947 aa14.27□□□□□ -0.12
HERPUD1-204ENST00000439977 B4GALT5O43286 388 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 ADCY3O60266 1144 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 ANP32DO95626 131 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 SLC8A1P32418 973 aa14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 VCPP55072 806 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 OASLQ15646 514 aaKnown RBP14.27□□□□□ -0.13
HERPUD1-204ENST00000439977 RNASEH2BQ5TBB1 312 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms