RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 L1RE1Q9UN81 338 aa17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 MTF2Q9Y483 593 aaPredicted RBP17.52■□□□□ 0.4
SNRPD3-204ENST00000439775 MIA3Q5JRA6 1907 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ZNF233A6NK53 670 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 SHISA7A6NL88 538 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 HEPACAM2A8MVW5 462 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ARNTLO00327 626 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 MAN2B1O00754 1011 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 NCAM2O15394 837 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 POLR2DO15514 142 aaKnown RBP17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 HUS1O60921 280 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 HAPLN1P10915 354 aaPredicted RBP17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 CD72P21854 359 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 GABRR2P28476 465 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 CDC25CP30307 473 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 GDI1P31150 447 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ME1P48163 572 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 RBP5P82980 135 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 SURF1Q15526 300 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 NFE2Q16621 373 aaPredicted RBP17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ARHGAP15Q53QZ3 475 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 STXBP5Q5T5C0 1151 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 RESP18Q5W5W9 173 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ZC3H14Q6PJT7 736 aaKnown RBP17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 UNC13DQ70J99 1090 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ANKRD36BP1Q96IX9 119 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 LPIN3Q9BQK8 851 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ACBD6Q9BR61 282 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ATXN3LQ9H3M9 355 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 INTS13Q9NVM9 706 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ABI2Q9NYB9 513 aaPredicted RBP17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 FAM13BQ9NYF5 915 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 HSPBP1Q9NZL4 362 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 CFAP45Q9UL16 551 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 PCDHA7Q9UN72 937 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 PCDHB5Q9Y5E4 795 aa17.51■□□□□ 0.39
SNRPD3-204ENST00000439775 ZNF263O14978 683 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 KRT19P08727 400 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 SP9P0CG40 484 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 WEE1P30291 646 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 MLLT6P55198 1093 aaPredicted RBP17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 SNRPFP62306 86 aaKnown RBP17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 FCHO2Q0JRZ9 810 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 BFSP1Q12934 665 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 PKP1Q13835 747 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 ZNF528Q3MIS6 628 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 FOXD4L6Q3SYB3 417 aaPredicted RBP17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 FOXD4L3Q6VB84 417 aaPredicted RBP17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 CBWD2Q8IUF1 395 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 WDR49Q8IV35 697 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 ARID3BQ8IVW6 561 aaPredicted RBP17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 MAML2Q8IZL2 1156 aaPredicted RBP17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 ZNF687Q8N1G0 1237 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 TOP6BLQ8N6T0 577 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 FAM200AQ8TCP9 573 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 RSPRY1Q96DX4 576 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 FAM84AQ96KN4 292 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 GCNAQ96QF7 691 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 IL21Q9HBE4 155 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 ABCB6Q9NP58 842 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 AGPAT3Q9NRZ7 376 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 DDX43Q9NXZ2 648 aaKnown RBP17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 OBP2AQ9NY56 170 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 ZMYM5Q9UJ78 669 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 FBXO4Q9UKT5 387 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 TCHHQ07283 1943 aa17.5■□□□□ 0.39
SNRPD3-204ENST00000439775 PTPRJQ12913 1337 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 PVALEFA0A1B0GWK0 134 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 CHADO15335 359 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 TGFB1I1O43294 461 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 MYL7Q01449 175 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 MYO1EQ12965 1108 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 INTS6LQ5JSJ4 861 aaKnown RBP17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 GPR158Q5T848 1215 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 ADGRF2Q8IZF7 708 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 SCFD1Q8WVM8 642 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 MSANTD3Q96H12 275 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 PKMYT1Q99640 499 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 TASP1Q9H6P5 420 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 TMLHEQ9NVH6 421 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 SPATA6Q9NWH7 488 aaPredicted RBP17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 SNX9Q9Y5X1 595 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 PIAS3Q9Y6X2 628 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 PATJQ8NI35 1801 aa17.49■□□□□ 0.39
SNRPD3-204ENST00000439775 TULP1O00294 542 aaPredicted RBP17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 GABRDO14764 452 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 LAMTOR5O43504 91 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 TNNC2P02585 160 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 LHX1P48742 406 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 FZD5Q13467 585 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 TAF12Q16514 161 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 SNRNP35Q16560 246 aaKnown RBP17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 DUOXA2Q1HG44 320 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 BMT2Q1RMZ1 405 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 LMBRD2Q68DH5 695 aaPredicted RBP17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 SCARA3Q6AZY7 606 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 C1orf228Q6PIY5 440 aa17.48■□□□□ 0.39
SNRPD3-204ENST00000439775 DPH6Q7L8W6 267 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms