RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 TRABD2AQ86V40 505 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 RIBC1Q8N443 379 aaPredicted RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 TRIB2Q92519 343 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 ABHD8Q96I13 439 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 C9orf72Q96LT7 481 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 MBOAT7Q96N66 472 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 ANO3Q9BYT9 981 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 SAR1AQ9NR31 198 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 GRID1Q9ULK0 1009 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 FRMD4BQ9Y2L6 1034 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 TNPO2O14787 897 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 HNRNPCL1O60812 293 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 HOXC6P09630 235 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 VPS41P49754 854 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 DYNC1I2Q13409 638 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 ZRSR2Q15696 482 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 PRR16Q569H4 304 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 GPATCH4Q5T3I0 446 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 SNRNP48Q6IEG0 339 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 DSTYKQ6XUX3 929 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 NLRP9Q7RTR0 991 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 ZC3H18Q86VM9 953 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 KSR1Q8IVT5 923 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 LMO3Q8TAP4 145 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 ETNPPLQ8TBG4 499 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 FAM210AQ96ND0 272 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 TEX13BQ9BXU2 312 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 CADM1Q9BY67 442 aaKnown RBP9.04□□□□□ -0.96
HPS4-206ENST00000439453 MAGEA13PA6NCF6 341 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 SMAPO00193 183 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 ZBTB5O15062 677 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 PRPF4O43172 522 aaKnown RBP eCLIP9.04□□□□□ -0.96
HPS4-206ENST00000439453 FAM13AO94988 1023 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 GAS8O95995 478 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 ICAM1P05362 532 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 MAN1A1P33908 653 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 CYP4A11Q02928 519 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 NR1H3Q13133 447 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 MYCT1Q8N699 235 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 GRK7Q8WTQ7 553 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 TIPINQ9BVW5 301 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 UBN1Q9NPG3 1134 aa9.04□□□□□ -0.96
HPS4-206ENST00000439453 GSTTP1A0A1W2PQM5 241 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 KRT36O76013 467 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 TJP3O95049 919 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 PRMT2P55345 433 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 SLC34A1Q06495 639 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 ZNF792Q3KQV3 632 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 MAP3K21Q5TCX8 1036 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 LRRC74BQ6ZQY2 392 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 ARHGEF19Q8IW93 802 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 TNS4Q8IZW8 715 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 CHURC1Q8WUH1 139 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 PLVAPQ9BX97 442 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 TRABDQ9H4I3 376 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 SLC15A5A6NIM6 579 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 C2CD2LO14523 706 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 CYP1A2P05177 515 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 ELNP15502 786 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 SAMD1Q6SPF0 538 aaPredicted RBP9.03□□□□□ -0.96
HPS4-206ENST00000439453 HS2ST1Q7LGA3 356 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 OTOAQ7RTW8 1153 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 MTDHQ86UE4 582 aaKnown RBP9.03□□□□□ -0.96
HPS4-206ENST00000439453 ABRAQ8N0Z2 381 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 GATA6Q92908 595 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 DCLK3Q9C098 648 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 MROH8Q9H579 483 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 CYLDQ9NQC7 956 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 DMAC2Q9NW81 257 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 CAPN9O14815 690 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 EXOC3O60645 756 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 SGPL1O95470 568 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 SLC25A27O95847 323 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 ABHD2P08910 425 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 GZMAP12544 262 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 ADORA2AP29274 412 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 RPA3P35244 121 aaPredicted RBP9.03□□□□□ -0.96
HPS4-206ENST00000439453 SLC18A1P54219 525 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 MAP2K5Q13163 448 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 KPNB1Q14974 876 aaKnown RBP9.03□□□□□ -0.96
HPS4-206ENST00000439453 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 ACSBG2Q5FVE4 666 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 RINT1Q6NUQ1 792 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 NSMFQ6X4W1 530 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 CLNKQ7Z7G1 428 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 PXYLP1Q8TE99 480 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 MAIP1Q8WWC4 291 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 RBM41Q96IZ5 413 aaKnown RBP9.03□□□□□ -0.96
HPS4-206ENST00000439453 GBP5Q96PP8 586 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 FAM192AQ9GZU8 254 aa9.03□□□□□ -0.96
HPS4-206ENST00000439453 METTL5Q9NRN9 209 aaKnown RBP9.03□□□□□ -0.96
HPS4-206ENST00000439453 SMG5Q9UPR3 1016 aaKnown RBP9.03□□□□□ -0.96
HPS4-206ENST00000439453 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
HPS4-206ENST00000439453 EXOC1LA0A1B0GW35 172 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 CCDC22O60826 627 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 PSMG1O95456 288 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 PYGLP06737 847 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 RRM1P23921 792 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 GCAP28676 217 aa9.02□□□□□ -0.96
HPS4-206ENST00000439453 AP1B1Q10567 949 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms