RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 ABRAQ8N0Z2 381 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 FAF2Q96CS3 445 aa12.18□□□□□ -0.46
TRAPPC9-202ENST00000438773 MAPK13O15264 365 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 MCF2P10911 925 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 GNL1P36915 607 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 C6orf118Q5T5N4 469 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 IZUMO3Q5VZ72 239 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 RWDD4Q6NW29 188 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 BZW1Q7L1Q6 419 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 VPS52Q8N1B4 723 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ATP2A3Q93084 1043 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 KLHL29Q96CT2 875 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ARHGEF26Q96DR7 871 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 SMC6Q96SB8 1091 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 TAS2R14Q9NYV8 317 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CPSF2Q9P2I0 782 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 MAGED2Q9UNF1 606 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 A0A0G2JLL6 359 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZBBXA8MT70 800 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 RALAP11233 206 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 TAF6P49848 677 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ARSEP51690 589 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CDH8P55286 799 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 FKBP1BP68106 108 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ADCY2Q08462 1091 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CLEC16AQ2KHT3 1053 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 FAM47EQ6ZV65 393 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CD302Q8IX05 232 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 SHCBP1Q8NEM2 672 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 GABPB2Q8TAK5 448 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 URGCPQ8TCY9 931 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 RUBCNQ92622 972 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 SNTG2Q9NY99 539 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 TLR2O60603 784 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CSPG5O95196 566 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 BAG2O95816 211 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CALCAP01258 141 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 MAGOHP61326 146 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 BEX3Q00994 111 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CAV1Q03135 178 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 C12orf56Q8IXR9 622 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 DAW1Q8N136 415 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ACSF2Q96CM8 615 aaPredicted RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 SNF8Q96H20 258 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ERP44Q9BS26 406 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 METTL5Q9NRN9 209 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 DHX15O43143 795 aaKnown RBP12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 MSH2P43246 934 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 PSMC4P43686 418 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 GOLGA7BQ2TAP0 167 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 SV2CQ496J9 727 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZNF449Q6P9G9 518 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 GPR20Q99678 358 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 SLC38A7Q9NVC3 462 aa12.17□□□□□ -0.46
TRAPPC9-202ENST00000438773 PAPPAQ13219 1627 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 NOL4O94818 638 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 ARL4CP56559 192 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 PTPN11Q06124 597 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZACNQ401N2 412 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 OR5B17Q8NGF7 314 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 CDKL2Q92772 493 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 KLC2Q9H0B6 622 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 ASB7Q9H672 318 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZNF112Q9UJU3 913 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 MYH1P12882 1939 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 LACTBL1A8MY62 500 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 MFSD10Q14728 455 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 CFAP157Q5JU67 520 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 TMCO4Q5TGY1 634 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 RNF180Q86T96 592 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 MCOLN2Q8IZK6 566 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 PPFIBP2Q8ND30 876 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 SHC3Q92529 594 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 RBPJLQ9UBG7 517 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 SSX2IPQ9Y2D8 614 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 AKR1A1P14550 325 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 AKAP5P24588 427 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 ICAM3P32942 547 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 LSP1P33241 339 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 TNFSF9P41273 254 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 EIF3EP60228 445 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 ZNF662Q6ZS27 426 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 SUGP1Q8IWZ8 645 aaKnown RBP12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 CEP120Q8N960 986 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.16□□□□□ -0.462e-6■■■■■ 55.6
TRAPPC9-202ENST00000438773 PGBD4Q96DM1 585 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 CD248Q9HCU0 757 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 PCDHGC5Q9Y5F6 944 aa12.16□□□□□ -0.46
TRAPPC9-202ENST00000438773 COL4A1P02462 1669 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 SLC15A5A6NIM6 579 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 CST8O60676 142 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 B3GAT3O94766 335 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 VDRP11473 427 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.46
TRAPPC9-202ENST00000438773 EEF1DP3Q658K8 133 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms