RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 TBC1D4O60343 1298 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 OAZ2O95190 189 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 CYP3A5P20815 502 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 LRPAP1P30533 357 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 LONP1P36776 959 aaKnown RBP8.41□□□□□ -1.06
VPS50-204ENST00000438395 TXLNAP40222 546 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 NRLP54845 237 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 MRPL58Q14197 206 aaKnown RBP8.41□□□□□ -1.06
VPS50-204ENST00000438395 LRRC32Q14392 662 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 TMEM132DQ14C87 1099 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 ENOX2Q16206 610 aaKnown RBP8.41□□□□□ -1.06
VPS50-204ENST00000438395 PRSS36Q5K4E3 855 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 LARP1BQ659C4 914 aaKnown RBP8.41□□□□□ -1.06
VPS50-204ENST00000438395 C1orf228Q6PIY5 440 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 BRAPQ7Z569 592 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 METTL23Q86XA0 190 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 CD302Q8IX05 232 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 GPR161Q8N6U8 529 aaKnown RBP8.41□□□□□ -1.06
VPS50-204ENST00000438395 MSANTD3Q96H12 275 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 PNMA5Q96PV4 448 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 KIF2CQ99661 725 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 FAM126AQ9BYI3 521 aaPredicted RBP8.41□□□□□ -1.06
VPS50-204ENST00000438395 CEP72Q9P209 647 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 DSEQ9UL01 958 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 TBX20Q9UMR3 447 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 MTF2Q9Y483 593 aaPredicted RBP8.41□□□□□ -1.06
VPS50-204ENST00000438395 ASB3Q9Y575 518 aa8.41□□□□□ -1.06
VPS50-204ENST00000438395 A0A1W2PRU2 124 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 TRAK2O60296 914 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 OR4Q2P0C623 313 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 GJA1P17302 382 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 PLCG1P19174 1290 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 TYMPP19971 482 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 PDCP20941 246 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 SDHBP21912 280 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 FCARP24071 287 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 TNFSF9P41273 254 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 VIPR2P41587 438 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 CCR2P41597 374 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 CCR3P51677 355 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 GUCY2FP51841 1108 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 LMNB2Q03252 620 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 DUSP4Q13115 394 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 MTAPQ13126 283 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 MYBPC2Q14324 1141 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 PUM1Q14671 1186 aaKnown RBP eCLIP8.4□□□□□ -1.06
VPS50-204ENST00000438395 TEAD2Q15562 447 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 C8orf34Q49A92 452 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 ADALQ6DHV7 355 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 JADE1Q6IE81 842 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 SLFN12LQ6IEE8 588 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 THEM5Q8N1Q8 247 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 SHKBP1Q8TBC3 707 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 FAM3CQ92520 227 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 LARP4BQ92615 738 aaKnown RBP8.4□□□□□ -1.06
VPS50-204ENST00000438395 RAD54LQ92698 747 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 CLDN23Q96B33 292 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 SEPT5Q99719 369 aaPredicted RBP8.4□□□□□ -1.06
VPS50-204ENST00000438395 PLA2G2FQ9BZM2 168 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 ATXN3LQ9H3M9 355 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 USP18Q9UMW8 372 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 DERAQ9Y315 318 aa8.4□□□□□ -1.06
VPS50-204ENST00000438395 R3HCC1Q9Y3T6 440 aaKnown RBP8.4□□□□□ -1.06
VPS50-204ENST00000438395 MYO15AQ9UKN7 3530 aa8.4□□□□□ -1.07
VPS50-204ENST00000438395 EPG5Q9HCE0 2579 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 MTCL1Q9Y4B5 1905 aaKnown RBP8.39□□□□□ -1.07
VPS50-204ENST00000438395 TPRP12270 2363 aaKnown RBP8.39□□□□□ -1.07
VPS50-204ENST00000438395 A0A0B4J269 797 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 HEPACAM2A8MVW5 462 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 PIGRP01833 764 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 NFICP08651 508 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 CDC25CP30307 473 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 TUFMP49411 452 aaKnown RBP8.39□□□□□ -1.07
VPS50-204ENST00000438395 AARSP49588 968 aaKnown RBP eCLIP8.39□□□□□ -1.07
VPS50-204ENST00000438395 EPHA5P54756 1037 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 LILRA4P59901 499 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 TSPY1Q01534 308 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 GPR17Q13304 367 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 MCM6Q14566 821 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 KARSQ15046 597 aaKnown RBP8.39□□□□□ -1.07
VPS50-204ENST00000438395 POSTNQ15063 836 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 MGAT5BQ3V5L5 792 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 GPR158Q5T848 1215 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
VPS50-204ENST00000438395 SPATA1Q5VX52 437 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 TSSK4Q6SA08 328 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 VITQ6UXI7 678 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 TREML4Q6UXN2 200 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 MAP4K3Q8IVH8 894 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 MFSD6LQ8IWD5 586 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 ATAD1Q8NBU5 361 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 POMGNT1Q8WZA1 660 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 RMDN1Q96DB5 314 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 SENP8Q96LD8 212 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 ZNF560Q96MR9 790 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 PYM1Q9BRP8 204 aaKnown RBP8.39□□□□□ -1.07
VPS50-204ENST00000438395 CHRDQ9H2X0 955 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 ASB7Q9H672 318 aa8.39□□□□□ -1.07
VPS50-204ENST00000438395 C8orf33Q9H7E9 229 aaPredicted RBP8.39□□□□□ -1.07
VPS50-204ENST00000438395 TRPV4Q9HBA0 871 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms