RNA–Protein interactions for RNA: ENST00000438279.1

AC009541.1-201, humanhuman

BASIC

Gene AC009541.1, Length 2,662 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009541.1-201ENST00000438279 KLF10Q13118 480 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 TAF2Q6P1X5 1199 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 FAM109AQ8N4B1 249 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 FAM156AQ8NDB6 213 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 OR6B3Q8NGW1 331 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 SLC9A6Q92581 669 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 SCAND2PQ9GZW5 306 aaPredicted RBP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 SMURF2Q9HAU4 748 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 MRPS18AQ9NVS2 196 aaKnown RBP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 KCTD5Q9NXV2 234 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 DMTF1Q9Y222 760 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 A0A087WWL8 130 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 CFAP69A5D8W1 941 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 TOR1BO14657 336 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 AKAP8O43823 692 aaKnown RBP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 GRPP07492 148 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 ITGAMP11215 1152 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 CYP2C9P11712 490 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 XRCC6P12956 609 aaKnown RBP eCLIP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 MYF5P13349 255 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 NPTX2P47972 431 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 SEMA5AQ13591 1074 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 KIAA0895LQ68EN5 471 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 VWA1Q6PCB0 445 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 ZNF783Q6ZMS7 281 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 CCDC149Q6ZUS6 474 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 MRGPRGQ86SM5 289 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 KRT78Q8N1N4 520 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 LCORLQ8N3X6 602 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 FAM46DQ8NEK8 389 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 SSH3Q8TE77 659 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 SNX19Q92543 992 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 TMEM125Q96AQ2 219 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 APIPQ96GX9 242 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 NELL2Q99435 816 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 P2RX7Q99572 595 aaKnown RBP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 LRRC27Q9C0I9 530 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 BTBD1Q9H0C5 482 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 TMPRSS5Q9H3S3 457 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 TOR3AQ9H497 397 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 RAD54BQ9Y620 910 aa3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.16□□□□□ -1.9
AC009541.1-201ENST00000438279 RHOBTB3O94955 611 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 ESRRBO95718 433 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 ATXN1LP0C7T5 689 aaKnown RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 SLC7A1P30825 629 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 GCLCP48506 637 aaPredicted RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 NDUFV1P49821 464 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 LOXL3P58215 753 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 FHL2Q14192 279 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 LLGL1Q15334 1064 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 LONRF3Q496Y0 759 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 HECTD2Q5U5R9 776 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 LAIR1Q6GTX8 287 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 PCSK4Q6UW60 755 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 COL23A1Q86Y22 540 aaPredicted RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 FAM9AQ8IZU1 332 aaPredicted RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 NSUN7Q8NE18 718 aaKnown RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 SORCS2Q96PQ0 1159 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 KRTAP4-11Q9BYQ6 195 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 BHMT2Q9H2M3 363 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 CYP4F11Q9HBI6 524 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 XPR1Q9UBH6 696 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 TESQ9UGI8 421 aaKnown RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 TPCN1Q9ULQ1 816 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 EPN1Q9Y6I3 576 aaPredicted RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 BTN3A1O00481 513 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 DCLK1O15075 740 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 TBX3O15119 743 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 TRIAP1O43715 76 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 MGEA5O60502 916 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 SLPIP03973 132 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 KITP10721 976 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 ITGALP20701 1170 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 GATA3P23771 443 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 SLC11A2P49281 568 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 SEC24CP53992 1094 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 MPP3Q13368 585 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 BOP1Q14137 746 aaKnown RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 PREPLQ4J6C6 727 aaPredicted RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 LMBRD2Q68DH5 695 aaPredicted RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 SFRP4Q6FHJ7 346 aaPredicted RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 SUPT20HQ8NEM7 779 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 NMD3Q96D46 503 aaKnown RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 PTCD3Q96EY7 689 aaKnown RBP3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 CCDC136Q96JN2 1154 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 MSLNLQ96KJ4 702 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 Q96MF0 132 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 PACSIN3Q9UKS6 424 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 TMX2Q9Y320 296 aa3.15□□□□□ -1.91
AC009541.1-201ENST00000438279 USP19O94966 1318 aa3.14□□□□□ -1.91
AC009541.1-201ENST00000438279 A0A0B4J269 797 aa3.14□□□□□ -1.91
AC009541.1-201ENST00000438279 TRIM43BA6NCK2 446 aa3.14□□□□□ -1.91
AC009541.1-201ENST00000438279 MBD3L4A6NDZ8 208 aaPredicted RBP3.14□□□□□ -1.91
AC009541.1-201ENST00000438279 MBD3L3A6NE82 208 aaPredicted RBP3.14□□□□□ -1.91
AC009541.1-201ENST00000438279 FOXN3O00409 490 aaPredicted RBP3.14□□□□□ -1.91
AC009541.1-201ENST00000438279 TRIM27P14373 513 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms