RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 ZMYND8Q9ULU4 1186 aaPredicted RBP10.36□□□□□ -0.75
CUBN-204ENST00000438254 BARX2Q9UMQ3 279 aaPredicted RBP10.36□□□□□ -0.75
CUBN-204ENST00000438254 REXO2Q9Y3B8 237 aaKnown RBP10.36□□□□□ -0.75
CUBN-204ENST00000438254 A0A087X0T9 212 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 CCDC85CA6NKD9 419 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 EIF3CLB5ME19 914 aaKnown RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 NRP1O14786 923 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 MAP3K7O43318 606 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 B3GAT3O94766 335 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 GJB5O95377 273 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 GALTP07902 379 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 PAEPP09466 180 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 CCDC172P0C7W6 258 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 FAM228BP0C875 321 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 CD58P19256 250 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 SLC11A1P49279 550 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 KIF11P52732 1056 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 NDST1P52848 882 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 YWHAEP62258 255 aaKnown RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 FMO1Q01740 532 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 ARID5AQ03989 594 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 TSR1Q2NL82 804 aaKnown RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 TMEM270Q6UE05 265 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 TOGARAM2Q6ZUX3 1019 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 TMCO2Q7Z6W1 182 aaPredicted RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 UNC93AQ86WB7 457 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 OSTM1Q86WC4 334 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 CMTR2Q8IYT2 770 aaKnown RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 ABI1Q8IZP0 508 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 PDCL2Q8N4E4 241 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 SPATA18Q8TC71 538 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 SLC20A1Q8WUM9 679 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 EIF3CQ99613 913 aaKnown RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 RTP3Q9BQQ7 232 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 IL21Q9HBE4 155 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 R3HCC1Q9Y3T6 440 aaKnown RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 PCDHB4Q9Y5E5 795 aa10.35□□□□□ -0.75
CUBN-204ENST00000438254 EPN1Q9Y6I3 576 aaPredicted RBP10.35□□□□□ -0.75
CUBN-204ENST00000438254 ATP8B3O60423 1300 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 CYB561D2O14569 222 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 UPP2O95045 317 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 NDUFA10O95299 355 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 CALCAP01258 141 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 KRT5P13647 590 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 TYMPP19971 482 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 BRCC3P46736 316 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 BPIFB4P59827 614 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 CDR2Q01850 454 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 BMS1Q14692 1282 aaKnown RBP10.34□□□□□ -0.75
CUBN-204ENST00000438254 SLC18A3Q16572 532 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 WSCD1Q658N2 575 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 TMEM173Q86WV6 379 aaPredicted RBP10.34□□□□□ -0.75
CUBN-204ENST00000438254 ZNF677Q86XU0 584 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 PALB2Q86YC2 1186 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 CRYBG2Q8N1P7 616 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 TMEM86AQ8N2M4 240 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 PHOSPHO2Q8TCD6 241 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 BCL7CQ8WUZ0 217 aaPredicted RBP10.34□□□□□ -0.75
CUBN-204ENST00000438254 TFAP2BQ92481 460 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 TRIM44Q96DX7 344 aaPredicted RBP10.34□□□□□ -0.75
CUBN-204ENST00000438254 TMEM176AQ96HP8 235 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 MMS19Q96T76 1030 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 SLC9A7Q96T83 725 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 PCDHB18PQ96TA0 734 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 AGPAT1Q99943 283 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 STXBP5LQ9Y2K9 1186 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
CUBN-204ENST00000438254 KIAA1671Q9BY89 1806 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 HCRTO43612 131 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 HUS1O60921 280 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 MMEP08473 750 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 CFHP08603 1231 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 UNGP13051 313 aaPredicted RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 LMO2P25791 158 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 GNA15P30679 374 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 CDH5P33151 784 aaPredicted RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 USP8P40818 1118 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 OR1G1P47890 313 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 PDE6CP51160 858 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 BCAR1P56945 870 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 GFPT1Q06210 699 aaPredicted RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 MRPL58Q14197 206 aaKnown RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 PAN2Q504Q3 1202 aaKnown RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 TDRD12Q587J7 1177 aaKnown RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 KIAA0319Q5VV43 1072 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 ZNF662Q6ZS27 426 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 ADGRF2Q8IZF7 708 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 TNS4Q8IZW8 715 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 APPL2Q8NEU8 664 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 HASPINQ8TF76 798 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 ZNF606Q8WXB4 792 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 DPF3Q92784 378 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 CCDC42Q96M95 316 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
CUBN-204ENST00000438254 PKMYT1Q99640 499 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 VN1R3Q9BXE9 311 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 NT5C1AQ9BXI3 368 aa10.33□□□□□ -0.76
CUBN-204ENST00000438254 SPTLC3Q9NUV7 552 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms