RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 STX17P56962 302 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 PPP3CAQ08209 521 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 DUSP4Q13115 394 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 PLD1Q13393 1074 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 NFE2Q16621 373 aaPredicted RBP17.54■□□□□ 0.4
CTSD-205ENST00000438213 TCERG1LQ5VWI1 586 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 KRT39Q6A163 491 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 PLCD3Q8N3E9 789 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 ATAD1Q8NBU5 361 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 GPT2Q8TD30 523 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 ZNF512Q96ME7 567 aaPredicted RBP17.54■□□□□ 0.4
CTSD-205ENST00000438213 PGLYRP2Q96PD5 576 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 TMEM209Q96SK2 561 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 DUSP9Q99956 384 aaKnown RBP17.54■□□□□ 0.4
CTSD-205ENST00000438213 MMRN2Q9H8L6 949 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 DACH1Q9UI36 760 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 RWDD2AQ9UIY3 292 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 INSL5Q9Y5Q6 135 aa17.54■□□□□ 0.4
CTSD-205ENST00000438213 CLUHO75153 1309 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 MTMR11A4FU01 709 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 EPHB3P54753 998 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 CCDC40Q4G0X9 1142 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 IQCEQ6IPM2 695 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 GRASPQ7Z6J2 395 aaPredicted RBP17.53■□□□□ 0.4
CTSD-205ENST00000438213 LRRTM3Q86VH5 581 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 SPPL2BQ8TCT7 592 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 SRRTQ9BXP5 876 aaKnown RBP17.53■□□□□ 0.4
CTSD-205ENST00000438213 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.53■□□□□ 0.4
CTSD-205ENST00000438213 CDH9Q9ULB4 789 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 PCDHB5Q9Y5E4 795 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 CUL9Q8IWT3 2517 aa17.53■□□□□ 0.4
CTSD-205ENST00000438213 ASS1P00966 412 aaKnown RBP17.52■□□□□ 0.4
CTSD-205ENST00000438213 NLRP12P59046 1061 aa17.52■□□□□ 0.4
CTSD-205ENST00000438213 TWF1Q12792 350 aa17.52■□□□□ 0.4
CTSD-205ENST00000438213 MAPRE1Q15691 268 aaKnown RBP17.52■□□□□ 0.4
CTSD-205ENST00000438213 DCAF17Q5H9S7 520 aaPredicted RBP17.52■□□□□ 0.4
CTSD-205ENST00000438213 INTS6LQ5JSJ4 861 aaKnown RBP17.52■□□□□ 0.4
CTSD-205ENST00000438213 OSTM1Q86WC4 334 aa17.52■□□□□ 0.4
CTSD-205ENST00000438213 TDRD5Q8NAT2 981 aaKnown RBP17.52■□□□□ 0.4
CTSD-205ENST00000438213 OR6B3Q8NGW1 331 aa17.52■□□□□ 0.4
CTSD-205ENST00000438213 CD320Q9NPF0 282 aa17.52■□□□□ 0.4
CTSD-205ENST00000438213 SLC27A5Q9Y2P5 690 aa17.52■□□□□ 0.4
CTSD-205ENST00000438213 PDGFRBP09619 1106 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 SP100P23497 879 aaPredicted RBP17.51■□□□□ 0.39
CTSD-205ENST00000438213 FSHRP23945 695 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 ACAT1P24752 427 aaKnown RBP17.51■□□□□ 0.39
CTSD-205ENST00000438213 LMO2P25791 158 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 MXI1P50539 228 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 PABPC1LQ4VXU2 614 aaKnown RBP17.51■□□□□ 0.39
CTSD-205ENST00000438213 CT47A1Q5JQC4 288 aaPredicted RBP17.51■□□□□ 0.39
CTSD-205ENST00000438213 ZDHHC14Q8IZN3 488 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 FBXL13Q8NEE6 735 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 FEZF2Q8TBJ5 459 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 TAS1R2Q8TE23 839 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 KBTBD7Q8WVZ9 684 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 MRPL45Q9BRJ2 306 aaKnown RBP17.51■□□□□ 0.39
CTSD-205ENST00000438213 DNMT3BQ9UBC3 853 aaKnown RBP17.51■□□□□ 0.39
CTSD-205ENST00000438213 ASB3Q9Y575 518 aa17.51■□□□□ 0.39
CTSD-205ENST00000438213 A8MXQ7 604 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 C2CD4DB7Z1M9 353 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 ZNF197O14709 1029 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 VNN2O95498 520 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 CCDC192P0DO97 292 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 GBP2P32456 591 aaPredicted RBP17.5■□□□□ 0.39
CTSD-205ENST00000438213 TPD52L1Q16890 204 aaPredicted RBP17.5■□□□□ 0.39
CTSD-205ENST00000438213 MGAT5BQ3V5L5 792 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 WDR44Q5JSH3 913 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 CYP4A22Q5TCH4 519 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 FAM171BQ6P995 826 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 C4orf50Q6ZRC1 276 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 RNF135Q8IUD6 432 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 SPATA2LQ8IUW3 424 aaPredicted RBP17.5■□□□□ 0.39
CTSD-205ENST00000438213 LEMD2Q8NC56 503 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 FAXDC2Q96IV6 333 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 SYT15Q9BQS2 421 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 ABCB6Q9NP58 842 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 AVENQ9NQS1 362 aaPredicted RBP17.5■□□□□ 0.39
CTSD-205ENST00000438213 RAB20Q9NX57 234 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 ABI2Q9NYB9 513 aaPredicted RBP17.5■□□□□ 0.39
CTSD-205ENST00000438213 GTF3C4Q9UKN8 822 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 YIPF1Q9Y548 306 aa17.5■□□□□ 0.39
CTSD-205ENST00000438213 ZFP37Q9Y6Q3 630 aaPredicted RBP17.5■□□□□ 0.39
CTSD-205ENST00000438213 BDP1A6H8Y1 2624 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 N4BP1O75113 896 aaKnown RBP17.49■□□□□ 0.39
CTSD-205ENST00000438213 RHOP08100 348 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 HAPLN1P10915 354 aaPredicted RBP17.49■□□□□ 0.39
CTSD-205ENST00000438213 TRIM21P19474 475 aaKnown RBP17.49■□□□□ 0.39
CTSD-205ENST00000438213 ERCC5P28715 1186 aaPredicted RBP17.49■□□□□ 0.39
CTSD-205ENST00000438213 CETN1Q12798 172 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 VEPH1Q14D04 833 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 TAF12Q16514 161 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 ITIH5Q86UX2 942 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 FAM200AQ8TCP9 573 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 SLC35C1Q96A29 364 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 FUBP3Q96I24 572 aaKnown RBP eCLIP17.49■□□□□ 0.39
CTSD-205ENST00000438213 SEPT5Q99719 369 aaPredicted RBP17.49■□□□□ 0.39
CTSD-205ENST00000438213 CORO1BQ9BR76 489 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 PI4K2AQ9BTU6 479 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 DNAI2Q9GZS0 605 aa17.49■□□□□ 0.39
CTSD-205ENST00000438213 CYP3A43Q9HB55 503 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms