RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 MMP8P22894 467 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 MYO1EQ12965 1108 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 KLF1Q13351 362 aaPredicted RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 HADHQ16836 314 aaKnown RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 ZNF568Q3ZCX4 644 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 GADL1Q6ZQY3 521 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 ZCCHC9Q8N567 271 aaKnown RBP17.65■□□□□ 0.42
TTC3-209ENST00000438055 VCPIP1Q96JH7 1222 aa17.65■□□□□ 0.42
TTC3-209ENST00000438055 POLR2BP30876 1174 aaKnown RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 HIF1AQ16665 826 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 KCTD6Q8NC69 237 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 SLCO1B3Q9NPD5 702 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 GJB1P08034 283 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 UBA1P22314 1058 aaKnown RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 COPS2P61201 443 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 GHRHRQ02643 423 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 ACTL9Q8TC94 416 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 PRCCQ92733 491 aaPredicted RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 N4BP2L2Q92802 583 aaPredicted RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 MYCBPQ99417 103 aaPredicted RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 MAK16Q9BXY0 300 aaKnown RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 PDLIM7Q9NR12 457 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 GINM1Q9NU53 330 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 ADCY3O60266 1144 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 ALDH3A1P30838 453 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 CDH8P55286 799 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 CDO1Q16878 200 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 TFDP3Q5H9I0 405 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.64■□□□□ 0.419e-14■■■□□ 14.6
TTC3-209ENST00000438055 GBP7Q8N8V2 638 aaPredicted RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 CEP120Q8N960 986 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 TRAPPC12Q8WVT3 735 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 RMDN2Q96LZ7 410 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 MAGEB18Q96M61 343 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 PLCD4Q9BRC7 762 aa17.64■□□□□ 0.41
TTC3-209ENST00000438055 DHX33Q9H6R0 707 aaKnown RBP17.64■□□□□ 0.41
TTC3-209ENST00000438055 NFASCO94856 1347 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 TMEM191CA6NGB0 347 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 EDN1P05305 212 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 GSTA1P08263 222 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 NQO1P15559 274 aaKnown RBP17.63■□□□□ 0.41
TTC3-209ENST00000438055 HIRAP54198 1017 aaPredicted RBP17.63■□□□□ 0.41
TTC3-209ENST00000438055 TGFB2P61812 414 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 OTUD4Q01804 1114 aaKnown RBP17.63■□□□□ 0.41
TTC3-209ENST00000438055 LY6KQ17RY6 165 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 ERP27Q96DN0 273 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 ANKRD36BP1Q96IX9 119 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 CFAP73A6NFT4 308 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 TOM1L1O75674 476 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 KCNA3P22001 575 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 SSTR1P30872 391 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 RFC1P35251 1148 aaPredicted RBP17.63■□□□□ 0.41
TTC3-209ENST00000438055 SGSM1Q2NKQ1 1148 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 ZC3H18Q86VM9 953 aaKnown RBP17.63■□□□□ 0.41
TTC3-209ENST00000438055 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.63■□□□□ 0.41
TTC3-209ENST00000438055 ZBTB10Q96DT7 871 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 ZBED3Q96IU2 234 aaPredicted RBP17.63■□□□□ 0.41
TTC3-209ENST00000438055 TTC25Q96NG3 672 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 NCAPGQ9BPX3 1015 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 GGA3Q9NZ52 723 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 POLIQ9UNA4 740 aa17.63■□□□□ 0.41
TTC3-209ENST00000438055 SPDYE16A6NNV3 312 aaPredicted RBP17.62■□□□□ 0.41
TTC3-209ENST00000438055 CTCFP49711 727 aaPredicted RBP17.62■□□□□ 0.41
TTC3-209ENST00000438055 VCPP55072 806 aaKnown RBP17.62■□□□□ 0.41
TTC3-209ENST00000438055 OGDHQ02218 1023 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 SCYL2Q6P3W7 929 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 BRSK2Q8IWQ3 736 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 FITM2Q8N6M3 262 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 CCDC134Q9H6E4 229 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 C19orf81C9J6K1 198 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 RNF8O76064 485 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 ALDH5A1P51649 535 aaPredicted RBP17.62■□□□□ 0.41
TTC3-209ENST00000438055 NCALDP61601 193 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 PIGHQ14442 188 aaPredicted RBP17.62■□□□□ 0.41
TTC3-209ENST00000438055 NAA25Q14CX7 972 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 PPP1R2P3Q6NXS1 205 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 TJP2Q9UDY2 1190 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 DCTN4Q9UJW0 460 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 ASS1P00966 412 aaKnown RBP17.62■□□□□ 0.41
TTC3-209ENST00000438055 CLNS1AP54105 237 aaKnown RBP17.62■□□□□ 0.41
TTC3-209ENST00000438055 ATP11AP98196 1134 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 ZNF667Q5HYK9 610 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 CATSPERGQ6ZRH7 1159 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 TFAP2BQ92481 460 aa17.62■□□□□ 0.41
TTC3-209ENST00000438055 KRT4P19013 534 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 FOXN2P32314 431 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 YWHAGP61981 247 aaKnown RBP eCLIP17.61■□□□□ 0.41
TTC3-209ENST00000438055 CTAGE3PQ8IX95 158 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 SEPT1Q8WYJ6 367 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 PHTF1Q9UMS5 762 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 SLC12A4Q9UP95 1085 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 GINS2Q9Y248 185 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 OGTO15294 1046 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 PHBP35232 272 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 ARL2P36404 184 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 PTP4A2Q12974 167 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 DENND1BQ6P3S1 775 aa17.61■□□□□ 0.41
TTC3-209ENST00000438055 C3orf62Q6ZUJ4 267 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms