RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 PLEKHA4Q9H4M7 779 aa22.4■■□□□ 1.18
PTPRF-207ENST00000436724 PGRMC1O00264 195 aaKnown RBP22.4■■□□□ 1.18
PTPRF-207ENST00000436724 MGEA5O60502 916 aa22.4■■□□□ 1.18
PTPRF-207ENST00000436724 CABYRO75952 493 aa22.4■■□□□ 1.18
PTPRF-207ENST00000436724 MLH1P40692 756 aa22.4■■□□□ 1.18
PTPRF-207ENST00000436724 SLC7A5Q01650 507 aa22.4■■□□□ 1.18
PTPRF-207ENST00000436724 SLAIN1Q8ND83 568 aa22.4■■□□□ 1.18
PTPRF-207ENST00000436724 CEP83Q9Y592 693 aa22.4■■□□□ 1.18
PTPRF-207ENST00000436724 GPR182O15218 404 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 MED7O43513 233 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 HCRTO43612 131 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 MYCP01106 439 aaPredicted RBP22.39■■□□□ 1.18
PTPRF-207ENST00000436724 IGFBP6P24592 240 aaPredicted RBP22.39■■□□□ 1.18
PTPRF-207ENST00000436724 PEX5P50542 639 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 RPL7AP62424 266 aaKnown RBP22.39■■□□□ 1.18
PTPRF-207ENST00000436724 PTK7Q13308 1070 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 LPIN1Q14693 890 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 SOWAHAQ2M3V2 549 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 TRIM71Q2Q1W2 868 aaKnown RBP22.39■■□□□ 1.18
PTPRF-207ENST00000436724 ZNF618Q5T7W0 954 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 HDXQ7Z353 690 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 GSTCDQ8NEC7 633 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 RNPC3Q96LT9 517 aaKnown RBP22.39■■□□□ 1.18
PTPRF-207ENST00000436724 ZNF518BQ9C0D4 1074 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 CARD9Q9H257 536 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.39■■□□□ 1.18
PTPRF-207ENST00000436724 DMGDHQ9UI17 866 aaKnown RBP22.39■■□□□ 1.18
PTPRF-207ENST00000436724 TRIM17Q9Y577 477 aa22.39■■□□□ 1.18
PTPRF-207ENST00000436724 MIF4GDA9UHW6 222 aaKnown RBP22.39■■□□□ 1.17
PTPRF-207ENST00000436724 H3BQF6 201 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 MYO1FO00160 1098 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 ERLIN1O75477 346 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 MICAL2O94851 1124 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 CD4P01730 458 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 FGGP02679 453 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 KCTD19Q17RG1 926 aaPredicted RBP22.39■■□□□ 1.17
PTPRF-207ENST00000436724 PTPN20Q4JDL3 420 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 ERICH1Q86X53 443 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 GAD1Q99259 594 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 NT5C1AQ9BXI3 368 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 ERVK-5Q9HDB9 667 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 CHST12Q9NRB3 414 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 TMEM59LQ9UK28 342 aa22.39■■□□□ 1.17
PTPRF-207ENST00000436724 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.39■■□□□ 1.17
PTPRF-207ENST00000436724 A0A1W2PQ45 241 aaPredicted RBP22.38■■□□□ 1.17
PTPRF-207ENST00000436724 A0A1W2PQY0 241 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 MOXD2PA6NHM9 499 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 O00370 1275 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 ITGA4P13612 1032 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 CYP3A5P20815 502 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 PAK2Q13177 524 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 ADAT2Q7Z6V5 191 aaKnown RBP22.38■■□□□ 1.17
PTPRF-207ENST00000436724 UBL4BQ8N7F7 174 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 KRT12Q99456 494 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 LHX5Q9H2C1 402 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 MRPL47Q9HD33 250 aaKnown RBP22.38■■□□□ 1.17
PTPRF-207ENST00000436724 PARVAQ9NVD7 372 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 KPNA7A9QM74 516 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 M0QYV0 167 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 SGO2Q562F6 1265 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 WDR93Q6P2C0 686 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 ACOT1Q86TX2 421 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 KLHL7Q8IXQ5 586 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 UBA3Q8TBC4 463 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 PPP1R10Q96QC0 940 aaKnown RBP22.38■■□□□ 1.17
PTPRF-207ENST00000436724 CPXM1Q96SM3 734 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 LPIN3Q9BQK8 851 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 WNT8AQ9H1J5 351 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 NR2E1Q9Y466 385 aa22.38■■□□□ 1.17
PTPRF-207ENST00000436724 CALB1P05937 261 aa22.37■■□□□ 1.17
PTPRF-207ENST00000436724 TUBBP07437 444 aa22.37■■□□□ 1.17
PTPRF-207ENST00000436724 VDRP11473 427 aa22.37■■□□□ 1.17
PTPRF-207ENST00000436724 CTNNA1P35221 906 aaKnown RBP22.37■■□□□ 1.17
PTPRF-207ENST00000436724 PPP1R2P3Q6NXS1 205 aa22.37■■□□□ 1.17
PTPRF-207ENST00000436724 MIOSQ9NXC5 875 aa22.37■■□□□ 1.17
PTPRF-207ENST00000436724 SCINQ9Y6U3 715 aa22.37■■□□□ 1.17
PTPRF-207ENST00000436724 TCRBV5S1A1TA0A578 114 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 XPOTO43592 962 aaKnown RBP22.36■■□□□ 1.17
PTPRF-207ENST00000436724 RPLP2P05387 115 aaKnown RBP22.36■■□□□ 1.17
PTPRF-207ENST00000436724 PYGMP11217 842 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 ATF7P17544 494 aaPredicted RBP22.36■■□□□ 1.17
PTPRF-207ENST00000436724 C8orf74Q6P047 294 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 AGMOQ6ZNB7 445 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 RNF169Q8NCN4 708 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 OR6B3Q8NGW1 331 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 MCEEQ96PE7 176 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 STARD7Q9NQZ5 370 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 PCDHA3Q9Y5H8 950 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 KRIT1O00522 736 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 CNGA2Q16280 664 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 FEZF2Q8TBJ5 459 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 DPEP3Q9H4B8 488 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 FAM49BQ9NUQ9 324 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 TSPAN16Q9UKR8 245 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 FRMPD3Q5JV73 1810 aa22.36■■□□□ 1.17
PTPRF-207ENST00000436724 TARSL2A2RTX5 802 aaKnown RBP22.35■■□□□ 1.17
PTPRF-207ENST00000436724 CCDC66A2RUB6 948 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 FGFR1P11362 822 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 GPD2P43304 727 aa22.35■■□□□ 1.17
PTPRF-207ENST00000436724 TAF6P49848 677 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms