RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 CD19P15391 556 aa24.49■■□□□ 1.51
CPSF4-204ENST00000436336 BRD2P25440 801 aaKnown RBP24.49■■□□□ 1.51
CPSF4-204ENST00000436336 MSNP26038 577 aaKnown RBP24.49■■□□□ 1.51
CPSF4-204ENST00000436336 CRYBG2Q8N1P7 616 aa24.49■■□□□ 1.51
CPSF4-204ENST00000436336 HEXIM2Q96MH2 286 aaKnown RBP24.49■■□□□ 1.51
CPSF4-204ENST00000436336 KCND1Q9NSA2 647 aa24.49■■□□□ 1.51
CPSF4-204ENST00000436336 NENFQ9UMX5 172 aa24.49■■□□□ 1.51
CPSF4-204ENST00000436336 PPP2R2CQ9Y2T4 447 aa24.49■■□□□ 1.51
CPSF4-204ENST00000436336 REXO2Q9Y3B8 237 aaKnown RBP24.49■■□□□ 1.51
CPSF4-204ENST00000436336 TIMM13Q9Y5L4 95 aaPredicted RBP24.49■■□□□ 1.51
CPSF4-204ENST00000436336 ZSCAN12O43309 604 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 LMO2P25791 158 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 CYP27A1Q02318 531 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 SGO2Q562F6 1265 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 SPOUT1Q5T280 376 aaKnown RBP24.48■■□□□ 1.51
CPSF4-204ENST00000436336 C10orf76Q5T2E6 689 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 ALKBH5Q6P6C2 394 aaKnown RBP24.48■■□□□ 1.51
CPSF4-204ENST00000436336 TFAP2BQ92481 460 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 TNIP3Q96KP6 325 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 PDCL3Q9H2J4 239 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 LUC7LQ9NQ29 371 aaKnown RBP24.48■■□□□ 1.51
CPSF4-204ENST00000436336 DDX43Q9NXZ2 648 aaKnown RBP24.48■■□□□ 1.51
CPSF4-204ENST00000436336 INSL6Q9Y581 213 aa24.48■■□□□ 1.51
CPSF4-204ENST00000436336 SF3B1O75533 1304 aaKnown RBP eCLIP24.47■■□□□ 1.512e-6■■■■■ 80.4
CPSF4-204ENST00000436336 SYN3O14994 580 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 CCP110O43303 1012 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 PDGFRBP09619 1106 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 LAG3P18627 525 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 ELAVL2Q12926 359 aaKnown RBP24.47■■□□□ 1.51
CPSF4-204ENST00000436336 CCDC122Q5T0U0 273 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 RASIP1Q5U651 963 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 TRIM72Q6ZMU5 477 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 ACOT1Q86TX2 421 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 HERC6Q8IVU3 1022 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 PCDHB18PQ96TA0 734 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 ZSWIM1Q9BR11 485 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 ZBED2Q9BTP6 218 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 PCDHGC3Q9UN70 934 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 MRPL42Q9Y6G3 142 aaKnown RBP24.47■■□□□ 1.51
CPSF4-204ENST00000436336 NLRC5Q86WI3 1866 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 NT5C1B-RDH14C9J2C7 533 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 PBX3P40426 434 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 STILQ15468 1287 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 FUT10Q6P4F1 479 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 KCNT2Q6UVM3 1135 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 PALB2Q86YC2 1186 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 CCAR2Q8N163 923 aaKnown RBP24.47■■□□□ 1.51
CPSF4-204ENST00000436336 DPEP3Q9H4B8 488 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 PCDHA13Q9Y5I0 950 aa24.47■■□□□ 1.51
CPSF4-204ENST00000436336 HCRTO43612 131 aa24.46■■□□□ 1.51
CPSF4-204ENST00000436336 GZMAP12544 262 aa24.46■■□□□ 1.51
CPSF4-204ENST00000436336 ATP2A2P16615 1042 aaKnown RBP24.46■■□□□ 1.51
CPSF4-204ENST00000436336 MAGEA1P43355 309 aa24.46■■□□□ 1.51
CPSF4-204ENST00000436336 ZNF558Q96NG5 402 aa24.46■■□□□ 1.51
CPSF4-204ENST00000436336 MYH10P35580 1976 aa24.45■■□□□ 1.51
CPSF4-204ENST00000436336 PCSK1P29120 753 aa24.45■■□□□ 1.5
CPSF4-204ENST00000436336 MAGEA10P43363 369 aaPredicted RBP24.45■■□□□ 1.5
CPSF4-204ENST00000436336 YWHAHQ04917 246 aaPredicted RBP24.45■■□□□ 1.5
CPSF4-204ENST00000436336 CNGA2Q16280 664 aa24.45■■□□□ 1.5
CPSF4-204ENST00000436336 OVOS1Q6IE37 1185 aa24.45■■□□□ 1.5
CPSF4-204ENST00000436336 TMEM173Q86WV6 379 aaPredicted RBP24.45■■□□□ 1.5
CPSF4-204ENST00000436336 CDH9Q9ULB4 789 aa24.45■■□□□ 1.5
CPSF4-204ENST00000436336 GBF1Q92538 1859 aa24.45■■□□□ 1.5
CPSF4-204ENST00000436336 CYP1A1P04798 512 aaPredicted RBP24.44■■□□□ 1.5
CPSF4-204ENST00000436336 VAV2P52735 878 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 KIAA1328Q86T90 577 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 THEM5Q8N1Q8 247 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 TXLNBQ8N3L3 684 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 FIBCD1Q8N539 461 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 C12orf29Q8N999 325 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 B3GALNT2Q8NCR0 500 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 IGSF21Q96ID5 467 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 RAD9AQ99638 391 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 ACBD6Q9BR61 282 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 GPR62Q9BZJ7 368 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.44■■□□□ 1.5
CPSF4-204ENST00000436336 ATP8B3O60423 1300 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 ESPNB1AK53 854 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 O00370 1275 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 CFHP08603 1231 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 UNGP13051 313 aaPredicted RBP24.44■■□□□ 1.5
CPSF4-204ENST00000436336 ACAT1P24752 427 aaKnown RBP24.44■■□□□ 1.5
CPSF4-204ENST00000436336 TKTP29401 623 aaKnown RBP24.44■■□□□ 1.5
CPSF4-204ENST00000436336 CLEC16AQ2KHT3 1053 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 FAM171A1Q5VUB5 890 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 ARHGAP17Q68EM7 881 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 COLGALT1Q8NBJ5 622 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 BCL7CQ8WUZ0 217 aaPredicted RBP24.44■■□□□ 1.5
CPSF4-204ENST00000436336 RTP3Q9BQQ7 232 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 SYT15Q9BQS2 421 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 ISCUQ9H1K1 167 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 AAASQ9NRG9 546 aa24.44■■□□□ 1.5
CPSF4-204ENST00000436336 TRMT1Q9NXH9 659 aaKnown RBP24.44■■□□□ 1.5
CPSF4-204ENST00000436336 RTN2O75298 545 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 OAZ2O95190 189 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 LSM8O95777 96 aaKnown RBP24.43■■□□□ 1.5
CPSF4-204ENST00000436336 EFEMP2O95967 443 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 PTPN1P18031 435 aaKnown RBP24.43■■□□□ 1.5
CPSF4-204ENST00000436336 FGFR3P22607 806 aa24.43■■□□□ 1.5
CPSF4-204ENST00000436336 PPP1R2P3Q6NXS1 205 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms