RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 AAASQ9NRG9 546 aa28.18■■■□□ 2.1
TMEM248-205ENST00000433271 EIF3CLB5ME19 914 aaKnown RBP28.17■■■□□ 2.1
TMEM248-205ENST00000433271 VDRP11473 427 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 SLC18A3Q16572 532 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 FAM171A1Q5VUB5 890 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 TAF3Q5VWG9 929 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 ACOT1Q86TX2 421 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 SLC30A5Q8TAD4 765 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 OLIG1Q8TAK6 271 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 TFAP2BQ92481 460 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 TNIP3Q96KP6 325 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 EIF3CQ99613 913 aaKnown RBP28.17■■■□□ 2.1
TMEM248-205ENST00000433271 PYCARDQ9ULZ3 195 aa28.17■■■□□ 2.1
TMEM248-205ENST00000433271 A0A087X0T9 212 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 DDX3XO00571 662 aaKnown RBP eCLIP28.16■■■□□ 2.15e-13■■■■■ 60.2
TMEM248-205ENST00000433271 LCA5LO95447 670 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 EFEMP2O95967 443 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 MMEP08473 750 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 FAM228BP0C875 321 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 CD19P15391 556 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 OVOS1Q6IE37 1185 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 SLC39A11Q8N1S5 342 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 CLP1Q92989 425 aaKnown RBP28.16■■■□□ 2.1
TMEM248-205ENST00000433271 GDF15Q99988 308 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 SPTLC3Q9NUV7 552 aa28.16■■■□□ 2.1
TMEM248-205ENST00000433271 HCRTO43612 131 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 FGFR3P22607 806 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 BRD2P25440 801 aaKnown RBP28.15■■■□□ 2.1
TMEM248-205ENST00000433271 PCSK1P29120 753 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 TKTP29401 623 aaKnown RBP28.15■■■□□ 2.1
TMEM248-205ENST00000433271 FMO1Q01740 532 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 YWHAHQ04917 246 aaPredicted RBP28.15■■■□□ 2.1
TMEM248-205ENST00000433271 GFPT1Q06210 699 aaPredicted RBP28.15■■■□□ 2.1
TMEM248-205ENST00000433271 TOGARAM2Q6ZUX3 1019 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 LNX1Q8TBB1 728 aaPredicted RBP28.15■■■□□ 2.1
TMEM248-205ENST00000433271 ZSWIM1Q9BR11 485 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 UBE2OQ9C0C9 1292 aaKnown RBP28.15■■■□□ 2.1
TMEM248-205ENST00000433271 DPEP3Q9H4B8 488 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 SPG21Q9NZD8 308 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 ZKSCAN5Q9Y2L8 839 aa28.15■■■□□ 2.1
TMEM248-205ENST00000433271 H0YGN5 161 aa28.14■■■□□ 2.1
TMEM248-205ENST00000433271 MED7O43513 233 aa28.14■■■□□ 2.1
TMEM248-205ENST00000433271 OAZ2O95190 189 aa28.14■■■□□ 2.1
TMEM248-205ENST00000433271 LINC00271P0C7V0 271 aa28.14■■■□□ 2.1
TMEM248-205ENST00000433271 SGO2Q562F6 1265 aa28.14■■■□□ 2.1
TMEM248-205ENST00000433271 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.14■■■□□ 2.1
TMEM248-205ENST00000433271 THEM5Q8N1Q8 247 aa28.14■■■□□ 2.1
TMEM248-205ENST00000433271 PCDHB12Q9Y5F1 795 aa28.14■■■□□ 2.1
TMEM248-205ENST00000433271 IPO7O95373 1038 aaKnown RBP28.14■■■□□ 2.09
TMEM248-205ENST00000433271 PPM1AP35813 382 aa28.14■■■□□ 2.09
TMEM248-205ENST00000433271 SPA17Q15506 151 aa28.14■■■□□ 2.09
TMEM248-205ENST00000433271 C12orf29Q8N999 325 aa28.14■■■□□ 2.09
TMEM248-205ENST00000433271 B3GALNT2Q8NCR0 500 aa28.14■■■□□ 2.09
TMEM248-205ENST00000433271 RTP3Q9BQQ7 232 aa28.14■■■□□ 2.09
TMEM248-205ENST00000433271 ACBD6Q9BR61 282 aa28.14■■■□□ 2.09
TMEM248-205ENST00000433271 SEPT11Q9NVA2 429 aaKnown RBP28.14■■■□□ 2.09
TMEM248-205ENST00000433271 CDH9Q9ULB4 789 aa28.14■■■□□ 2.09
TMEM248-205ENST00000433271 ACAT1P24752 427 aaKnown RBP28.13■■■□□ 2.09
TMEM248-205ENST00000433271 CNGA2Q16280 664 aa28.13■■■□□ 2.09
TMEM248-205ENST00000433271 TMEM169Q96HH4 297 aa28.13■■■□□ 2.09
TMEM248-205ENST00000433271 PCDHB18PQ96TA0 734 aa28.13■■■□□ 2.09
TMEM248-205ENST00000433271 PDCL3Q9H2J4 239 aa28.13■■■□□ 2.09
TMEM248-205ENST00000433271 NAGPAQ9UK23 515 aa28.13■■■□□ 2.09
TMEM248-205ENST00000433271 PCDHGC3Q9UN70 934 aa28.13■■■□□ 2.09
TMEM248-205ENST00000433271 ADGRG1Q9Y653 693 aa28.13■■■□□ 2.09
TMEM248-205ENST00000433271 ZNF263O14978 683 aa28.12■■■□□ 2.09
TMEM248-205ENST00000433271 PTPN1P18031 435 aaKnown RBP28.12■■■□□ 2.09
TMEM248-205ENST00000433271 STILQ15468 1287 aa28.12■■■□□ 2.09
TMEM248-205ENST00000433271 VARS2Q5ST30 1063 aaKnown RBP28.12■■■□□ 2.09
TMEM248-205ENST00000433271 TRIM72Q6ZMU5 477 aa28.12■■■□□ 2.09
TMEM248-205ENST00000433271 CEP57Q86XR8 500 aa28.12■■■□□ 2.09
TMEM248-205ENST00000433271 RNF168Q8IYW5 571 aaPredicted RBP28.12■■■□□ 2.09
TMEM248-205ENST00000433271 SYT15Q9BQS2 421 aa28.12■■■□□ 2.09
TMEM248-205ENST00000433271 DESI2Q9BSY9 194 aa28.12■■■□□ 2.09
TMEM248-205ENST00000433271 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.12■■■□□ 2.09
TMEM248-205ENST00000433271 TSC2P49815 1807 aa28.12■■■□□ 2.09
TMEM248-205ENST00000433271 LCHNA4D1U4 455 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 O00370 1275 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 KRT83P78385 493 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 CYP27A1Q02318 531 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 MRPL58Q14197 206 aaKnown RBP28.11■■■□□ 2.09
TMEM248-205ENST00000433271 KIAA0319Q5VV43 1072 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 ALKBH5Q6P6C2 394 aaKnown RBP28.11■■■□□ 2.09
TMEM248-205ENST00000433271 PALB2Q86YC2 1186 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 TTPALQ9BTX7 342 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 NENFQ9UMX5 172 aa28.11■■■□□ 2.09
TMEM248-205ENST00000433271 ATP2C2O75185 946 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 CFHP08603 1231 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 GZMAP12544 262 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 RGS19P49795 217 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 RABGGTBP53611 331 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 PSMC1P62191 440 aaKnown RBP28.1■■■□□ 2.09
TMEM248-205ENST00000433271 USP41Q3LFD5 358 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 ARHGAP17Q68EM7 881 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 LCLAT1Q6UWP7 414 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 TAS1R1Q7RTX1 841 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 ACRBPQ8NEB7 543 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 VN1R3Q9BXE9 311 aa28.1■■■□□ 2.09
TMEM248-205ENST00000433271 WDR3Q9UNX4 943 aaKnown RBP eCLIP28.1■■■□□ 2.09
TMEM248-205ENST00000433271 REXO2Q9Y3B8 237 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms