RNA–Protein interactions for RNA: ENST00000433179.3

PERM1-202, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PERM1, Length 3,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-202ENST00000433179 PPP2R5EQ16537 467 aa13.82□□□□□ -0.2
PERM1-202ENST00000433179 CCDC60Q8IWA6 550 aaPredicted RBP13.82□□□□□ -0.2
PERM1-202ENST00000433179 RBBP8NLQ8NC74 664 aaPredicted RBP13.82□□□□□ -0.2
PERM1-202ENST00000433179 ERP27Q96DN0 273 aa13.82□□□□□ -0.2
PERM1-202ENST00000433179 ANKRD27Q96NW4 1050 aa13.82□□□□□ -0.2
PERM1-202ENST00000433179 HNRNPDLO14979 420 aaKnown RBP13.81□□□□□ -0.2
PERM1-202ENST00000433179 THAP12O43422 761 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 NR3C2P08235 984 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 TMEM253P0C7T8 217 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 PYGMP11217 842 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 ACADSP16219 412 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 EPHB2P29323 1055 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 CHRNA3P32297 505 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 PPATQ06203 517 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 PITPNM3Q9BZ71 974 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 ST6GALNAC4Q9H4F1 302 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 KMT5AQ9NQR1 393 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 ADARB2Q9NS39 739 aaKnown RBP13.81□□□□□ -0.2
PERM1-202ENST00000433179 ETNK2Q9NVF9 386 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 MTUS1Q9ULD2 1270 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 A0A0A6YYK5 440 aaPredicted RBP13.81□□□□□ -0.2
PERM1-202ENST00000433179 STBD1O95210 358 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 GM2AP17900 193 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 PAX3P23760 479 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 CYP4F22Q6NT55 531 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 STXBP4Q6ZWJ1 553 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 CDR2LQ86X02 465 aaPredicted RBP13.81□□□□□ -0.2
PERM1-202ENST00000433179 TMEM161BQ8NDZ6 487 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 RDM1Q8NG50 284 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 EPS8L1Q8TE68 723 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 ATG4AQ8WYN0 398 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 PARP2Q9UGN5 583 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 TBX20Q9UMR3 447 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 NFASCO94856 1347 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 SYNGAP1Q96PV0 1343 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 PASKQ96RG2 1323 aa13.81□□□□□ -0.2
PERM1-202ENST00000433179 GTPBP10A4D1E9 387 aaKnown RBP13.8□□□□□ -0.2
PERM1-202ENST00000433179 TTLL13PA6NNM8 815 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 SETDB1Q15047 1291 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 CNPY1Q3B7I2 92 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 FAM13CQ8NE31 585 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 UTP4Q969X6 686 aaKnown RBP13.8□□□□□ -0.2
PERM1-202ENST00000433179 CLMNQ96JQ2 1002 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 RXFP1Q9HBX9 757 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 KLHL11Q9NVR0 708 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 SEL1LQ9UBV2 794 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 KCNH4Q9UQ05 1017 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 ZNFX1Q9P2E3 1918 aaKnown RBP13.8□□□□□ -0.2
PERM1-202ENST00000433179 PODXLO00592 558 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 STAM2O75886 525 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 HP1BP3Q5SSJ5 553 aaPredicted RBP13.8□□□□□ -0.2
PERM1-202ENST00000433179 ZC3H15Q8WU90 426 aaKnown RBP13.8□□□□□ -0.2
PERM1-202ENST00000433179 OTUD5Q96G74 571 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 ZNF711Q9Y462 761 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 PTPRJQ12913 1337 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 SPAG7O75391 227 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 GSTA2P09210 222 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 POTEJP0CG39 1038 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 RARGP13631 454 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 TMEM132BQ14DG7 1078 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 SNX30Q5VWJ9 437 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 NLRX1Q86UT6 975 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 PPFIBP2Q8ND30 876 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 SCG3Q8WXD2 468 aaKnown RBP13.8□□□□□ -0.2
PERM1-202ENST00000433179 RUNDC3BQ96NL0 473 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 MKNK1Q9BUB5 465 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 ANKFY1Q9P2R3 1169 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 LRCH1Q9Y2L9 728 aa13.8□□□□□ -0.2
PERM1-202ENST00000433179 A0A0G2JLL6 359 aaPredicted RBP13.79□□□□□ -0.2
PERM1-202ENST00000433179 SPATA31D3P0C874 917 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 EIF4BP23588 611 aaKnown RBP13.79□□□□□ -0.2
PERM1-202ENST00000433179 INHBCP55103 352 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 DNAJC3Q13217 504 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 SPATA31D4Q6ZUB0 917 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 SV2AQ7L0J3 742 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 PRRT2Q7Z6L0 340 aaPredicted RBP13.79□□□□□ -0.2
PERM1-202ENST00000433179 CROCCP2Q86T23 111 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 SULF1Q8IWU6 871 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.79□□□□□ -0.2
PERM1-202ENST00000433179 ZNF653Q96CK0 615 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 C9orf72Q96LT7 481 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 HERPUD2Q9BSE4 406 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 NUP85Q9BW27 656 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 ELP3Q9H9T3 547 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 STOML1Q9UBI4 398 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 CCDC160A6NGH7 325 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 CLDN3O15551 220 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 TMCC1O94876 653 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 UNC5CO95185 931 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 EDNRBP24530 442 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 PSMC5P62195 406 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 FMO1Q01740 532 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 CBX3Q13185 183 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 MPP2Q14168 576 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 ZRSR2Q15696 482 aaKnown RBP13.79□□□□□ -0.2
PERM1-202ENST00000433179 GALNTL6Q49A17 601 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.79□□□□□ -0.2
PERM1-202ENST00000433179 RFX8Q6ZV50 586 aa13.79□□□□□ -0.2
PERM1-202ENST00000433179 SPOCK2Q92563 424 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms