RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 WDR91A4D1P6 747 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 CXCL11O14625 94 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 ADORA2AP29274 412 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 ADORA2BP29275 332 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 GCKP35557 465 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 ARL2P36404 184 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 CDH6P55285 790 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 TNFAIP2Q03169 654 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 SWT1Q5T5J6 900 aaKnown RBP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 PPP1R2P3Q6NXS1 205 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 CASC4Q6P4E1 433 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 C1orf228Q6PIY5 440 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 FAM47EQ6ZV65 393 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 PNMA8AQ86V59 439 aaPredicted RBP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 TRAIPQ9BWF2 469 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 DNAI2Q9GZS0 605 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 R3HDM2Q9Y2K5 976 aaKnown RBP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 RASA4BC9J798 803 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 RASA4O43374 803 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 SPAG7O75391 227 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 VNN1O95497 513 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 NFICP08651 508 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 ITIH2P19823 946 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 PEX19P40855 299 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 PDIA2Q13087 525 aaKnown RBP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 SMAD1Q15797 465 aaKnown RBP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 CCDC197Q8NCU1 140 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 MYCBPAPQ8TBZ2 947 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 GPR20Q99678 358 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 ACO2Q99798 780 aaKnown RBP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 TMEM121Q9BTD3 319 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 RNPEPQ9H4A4 650 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 KLK14Q9P0G3 267 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 TMEM59LQ9UK28 342 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 MYPNQ86TC9 1320 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 ACKR2O00590 384 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 FAM133BQ5BKY9 247 aaKnown RBP12.03□□□□□ -0.48
CLDN4-202ENST00000431918 RCOR2Q8IZ40 523 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 MREGQ8N565 214 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
CLDN4-202ENST00000431918 LACTBL1A8MY62 500 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 H3BRB1 525 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 MYL3P08590 195 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 PDGFRAP16234 1089 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 IFRD2Q12894 506 aaPredicted RBP12.02□□□□□ -0.48
CLDN4-202ENST00000431918 CCDC33Q8N5R6 958 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 PYROXD1Q8WU10 500 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 DCLK3Q9C098 648 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 R3HDMLQ9H3Y0 253 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 TUT1Q9H6E5 874 aaKnown RBP12.02□□□□□ -0.48
CLDN4-202ENST00000431918 SETD4Q9NVD3 440 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 IRAK4Q9NWZ3 460 aa12.02□□□□□ -0.48
CLDN4-202ENST00000431918 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.02□□□□□ -0.49
CLDN4-202ENST00000431918 SLC8A3P57103 927 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 LAMC2Q13753 1193 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 TMEM63BQ5T3F8 832 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 AGBL2Q5U5Z8 902 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 DENND1BQ6P3S1 775 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 RAPGEF5Q92565 580 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 FBXL18Q96ME1 805 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 MROH8Q9H579 483 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 TMEM134Q9H6X4 195 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 SMYD3Q9H7B4 428 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 MAD1L1Q9Y6D9 718 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 PDHXO00330 501 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 NPTXRO95502 500 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 ETS1P14921 441 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 HNRNPH1P31943 449 aaKnown RBP12.02□□□□□ -0.49
CLDN4-202ENST00000431918 FAM182AQ5T1J6 154 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 CCDC63Q8NA47 563 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 SH3GL2Q99962 352 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 CDT1Q9H211 546 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 AVENQ9NQS1 362 aaPredicted RBP12.02□□□□□ -0.49
CLDN4-202ENST00000431918 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.02□□□□□ -0.49
CLDN4-202ENST00000431918 NEU2Q9Y3R4 380 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 LRRC37AA6NMS7 1700 aa12.02□□□□□ -0.49
CLDN4-202ENST00000431918 A8MXQ7 604 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 KRT7P08729 469 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 RARGP13631 454 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 PIGHQ14442 188 aaPredicted RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CENPUQ71F23 418 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CHMP6Q96FZ7 201 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CFAP57Q96MR6 1250 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 XPO6Q96QU8 1125 aaKnown RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 SNX25Q9H3E2 840 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 SLC5A4Q9NY91 659 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 SEPT10Q9P0V9 454 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 DNPEPQ9ULA0 475 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 HES2Q9Y543 173 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 ASAP2O43150 1006 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 ASS1P00966 412 aaKnown RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 LGALS2P05162 132 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CA4P22748 312 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
CLDN4-202ENST00000431918 CEP128Q6ZU80 1094 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 TMEM192Q8IY95 271 aa12.01□□□□□ -0.49
CLDN4-202ENST00000431918 RBPJLQ9UBG7 517 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms