RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 PACSIN1Q9BY11 444 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 SLC12A5Q9H2X9 1139 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 PRDM12Q9H4Q4 367 aa2.7□□□□□ -1.98
CDC40-204ENST00000431461 SARS2Q9NP81 518 aaKnown RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 AJAP1Q9UKB5 411 aaPredicted RBP2.7□□□□□ -1.98
CDC40-204ENST00000431461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.7□□□□□ -1.98
CDC40-204ENST00000431461 ZNF804BA4D1E1 1349 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 AOX1Q06278 1338 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 A0A088AWK7 358 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 CAPN8A6NHC0 703 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 PHGDHO43175 533 aaKnown RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 AP1G1O43747 822 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 PEX1O43933 1283 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 ZBED1O96006 694 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 PRKCGP05129 697 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 THP07101 528 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 RAP2AP10114 183 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 CKBP12277 381 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 XRCC6P12956 609 aaKnown RBP eCLIP2.69□□□□□ -1.98
CDC40-204ENST00000431461 FOXG1P55316 489 aaPredicted RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 HSD11B2P80365 405 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 TLE1Q04724 770 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 KLF9Q13886 244 aaPredicted RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 HABP2Q14520 560 aaPredicted RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 ETFDHQ16134 617 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 MTX3Q5HYI7 312 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 EMC10Q5UCC4 262 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 DARS2Q6PI48 645 aaKnown RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 Q6ZVL8 140 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 CHST15Q7LFX5 561 aaPredicted RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 AMIGO2Q86SJ2 522 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 FITM2Q8N6M3 262 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 IL17RDQ8NFM7 739 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 TTC8Q8TAM2 541 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 CCHCR1Q8TD31 782 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 IPCEF1Q8WWN9 437 aaPredicted RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 TMX3Q96JJ7 454 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 MRGPRX4Q96LA9 322 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 FCRL4Q96PJ5 515 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 SLC2A13Q96QE2 648 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 TAAR9Q96RI9 348 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 MRI1Q9BV20 369 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 GTPBP4Q9BZE4 634 aaKnown RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 ZNF700Q9H0M5 742 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 DMRT3Q9NQL9 472 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 LMBRD1Q9NUN5 540 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 PIH1D1Q9NWS0 290 aaKnown RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 FLRT1Q9NZU1 646 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 JKAMPQ9P055 326 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 RGS17Q9UGC6 210 aaPredicted RBP2.69□□□□□ -1.98
CDC40-204ENST00000431461 LIMCH1Q9UPQ0 1083 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 AATKQ6ZMQ8 1374 aa2.69□□□□□ -1.98
CDC40-204ENST00000431461 ZNF521Q96K83 1311 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 ISM1B1AKI9 464 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 GOLIM4O00461 696 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 WNT10BO00744 389 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 MPPED1O15442 326 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 ORC4O43929 436 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 PRSS23O95084 383 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 TYRP14679 529 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 MALP21145 153 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 GPD1P21695 349 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 EDNRBP24530 442 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 GRIA3P42263 894 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 SLC6A9P48067 706 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 PIK3CGP48736 1102 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 AGFG1P52594 562 aaKnown RBP2.68□□□□□ -1.98
CDC40-204ENST00000431461 RAP2BP61225 183 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 ATP8B2P98198 1209 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 SEPT2Q15019 361 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 POLD3Q15054 466 aaPredicted RBP2.68□□□□□ -1.98
CDC40-204ENST00000431461 TMEM119Q4V9L6 283 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 AFMIDQ63HM1 303 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 SLC4A10Q6U841 1118 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 ZNF365Q70YC5 407 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 TPH2Q8IWU9 490 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 Q8NA96 180 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 KLHDC4Q8TBB5 520 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 IFI44Q8TCB0 444 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 NUP133Q8WUM0 1156 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 SCAMP4Q969E2 229 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 LRRC27Q9C0I9 530 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 ZCWPW1Q9H0M4 648 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 NUP62CLQ9H1M0 184 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 PNPOQ9NVS9 261 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 OBP2AQ9NY56 170 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 SIK3Q9Y2K2 1263 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 CACNA1IQ9P0X4 2223 aa2.68□□□□□ -1.98
CDC40-204ENST00000431461 A0A1W2PPL8 197 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 ANO9A1A5B4 782 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 VSTM5A8MXK1 200 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 H3BUI4 141 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 YY2O15391 372 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 SLC43A1O75387 559 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 TUSC2O75896 110 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 UBXN7O94888 489 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 INMTO95050 263 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 CD1AP06126 327 aa2.67□□□□□ -1.98
CDC40-204ENST00000431461 NBPF7P0C2Y1 421 aaPredicted RBP2.67□□□□□ -1.98
CDC40-204ENST00000431461 SRGNP10124 158 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms