RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 XYLT2Q9H1B5 865 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 AS3MTQ9HBK9 375 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 USP40Q9NVE5 1235 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 RGL1Q9NZL6 768 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 IGSF9Q9P2J2 1179 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 DNMT3BQ9UBC3 853 aaKnown RBP3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 HSFX1Q9UBD0 423 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 MID2Q9UJV3 735 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLC39A10Q9ULF5 831 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZFR2Q9UPR6 939 aaKnown RBP3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 JAG2Q9Y219 1238 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 TMX2Q9Y320 296 aa3.79□□□□□ -1.8
HMGB1P27-201ENST00000431429 hCG_1642624A0A1W2PR95 340 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 FAM234BA2RU67 622 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 OR2W5A6NFC9 320 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 MARCH11A6NNE9 402 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 E7ENX8 843 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 LEFTY2O00292 366 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 PAX4O43316 350 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 MFAP3LO75121 409 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 SKAP2O75563 359 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 NDST3O95803 873 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 ACVR2AP27037 513 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 MSX2P35548 267 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 RENBPP51606 427 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 TAP2Q03519 686 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 STARD3Q14849 445 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 RAB30Q15771 203 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZNF124Q15973 351 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 PFKFB4Q16877 469 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZIK1Q3SY52 487 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 CCDC38Q502W7 563 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 SPOCD1Q6ZMY3 1216 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 RNF44Q7L0R7 432 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 KRT73Q86Y46 540 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 TXLNBQ8N3L3 684 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 FAM109AQ8N4B1 249 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 MYCT1Q8N699 235 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLC17A8Q8NDX2 589 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 FAM71BQ8TC56 605 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 STT3BQ8TCJ2 826 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZNF483Q8TF39 744 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 EID2BQ96D98 161 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 TMEM176AQ96HP8 235 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 OR14A2Q96R54 314 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 IMPG2Q9BZV3 1241 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 MS4A7Q9GZW8 240 aaPredicted RBP3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 MAGEH1Q9H213 219 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZNF212Q9UDV6 495 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 GJD2Q9UKL4 321 aa3.78□□□□□ -1.8
HMGB1P27-201ENST00000431429 LOC102723971A0A1B0GUV8 181 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 KRTAP23-1A1A580 65 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 LGALS16A8MUM7 142 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 DIRC3C9JPN6 131 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 ACKR2O00590 384 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 DHHO43323 396 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 ELANEP08246 267 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 XRCC6P12956 609 aaKnown RBP eCLIP3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 HSD3B1P14060 373 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 EGR1P18146 543 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 CNR2P34972 360 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF134P52741 427 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 POU5F1BQ06416 359 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 SPARCL1Q14515 664 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF750Q32MQ0 723 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 AMOTQ4VCS5 1084 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 PLAG1Q6DJT9 500 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 LIN54Q6MZP7 749 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 TAPT1Q6NXT6 567 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 YAF2Q8IY57 180 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 SMAP1Q8IYB5 467 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 LRRC56Q8IYG6 542 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 CPXCR1Q8N123 301 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 ANKRD35Q8N283 1001 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 PCSK9Q8NBP7 692 aaKnown RBP3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 TRAPPC12Q8WVT3 735 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 IPCEF1Q8WWN9 437 aaPredicted RBP3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 FUBP1Q96AE4 644 aaKnown RBP3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 MARS2Q96GW9 593 aaKnown RBP3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 TOX2Q96NM4 488 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 WWC2-AS2Q96NR7 200 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 MED15Q96RN5 788 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 PNKPQ96T60 521 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 UBA5Q9GZZ9 404 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 MYLK2Q9H1R3 596 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 OBP2BQ9NPH6 170 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 GRHPRQ9UBQ7 328 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZNF69Q9UC07 566 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 HDAC5Q9UQL6 1122 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 ATP11BQ9Y2G3 1177 aa3.77□□□□□ -1.81
HMGB1P27-201ENST00000431429 SPATA31A3Q5VYP0 1347 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 CCDC195A0A1B0GUA6 201 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 A0A1W2PS29 197 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 PODXLO00592 558 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 SUN1O94901 812 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 INMTO95050 263 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 ZFPL1O95159 310 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 ATXN1LP0C7T5 689 aaKnown RBP3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 HK1P19367 917 aa3.76□□□□□ -1.81
HMGB1P27-201ENST00000431429 SLC5A2P31639 672 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms