RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 MICAL2O94851 1124 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 TCF4P15884 667 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 SP3Q02447 781 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 C12orf29Q8N999 325 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 BEST2Q8NFU1 509 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 MRPL45Q9BRJ2 306 aaKnown RBP17.67■□□□□ 0.42
USHBP1-203ENST00000431146 TRIM51Q9BSJ1 452 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 ZNF518BQ9C0D4 1074 aa17.67■□□□□ 0.42
USHBP1-203ENST00000431146 UPF3AQ9H1J1 476 aaKnown RBP17.67■□□□□ 0.42
USHBP1-203ENST00000431146 BARX2Q9UMQ3 279 aaPredicted RBP17.67■□□□□ 0.42
USHBP1-203ENST00000431146 GOLGA6L10A0A0M3HER8 536 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 SMIM28A0A1B0GU29 152 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 TCRBV5S1A1TA0A578 114 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 M0QYV0 167 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 KPNA6O60684 536 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 ASGR1P07306 291 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 TNFRSF8P28908 595 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 EPHB4P54760 987 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 MRPS6P82932 125 aaKnown RBP17.66■□□□□ 0.42
USHBP1-203ENST00000431146 OGDHQ02218 1023 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 ZNF252P-AS1Q0IIN9 211 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 PPP1R2P3Q6NXS1 205 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 TAF2Q6P1X5 1199 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 PRELID2Q8N945 189 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 SMG8Q8ND04 991 aaKnown RBP17.66■□□□□ 0.42
USHBP1-203ENST00000431146 UBA3Q8TBC4 463 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 C18orf8Q96DM3 657 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 CPXM1Q96SM3 734 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 SLITRK6Q9H5Y7 841 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 DERAQ9Y315 318 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 CASP8AP2Q9UKL3 1982 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 TMEM191CA6NGB0 347 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 HCRTO43612 131 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 SLC1A1P43005 524 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 INCA1Q0VD86 236 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 NFX1Q12986 1120 aaKnown RBP17.66■□□□□ 0.42
USHBP1-203ENST00000431146 KCNA10Q16322 511 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 C9orf57Q5W0N0 161 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 DCUN1D2Q6PH85 259 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 SLC13A5Q86YT5 568 aaPredicted RBP17.66■□□□□ 0.42
USHBP1-203ENST00000431146 PLCD3Q8N3E9 789 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 FAXDC2Q96IV6 333 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 OSBPL7Q9BZF2 842 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 TRIM31Q9BZY9 425 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 HPCAL4Q9UM19 191 aa17.66■□□□□ 0.42
USHBP1-203ENST00000431146 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.66■□□□□ 0.42
USHBP1-203ENST00000431146 MEIS3P2A8K0S8 358 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 PIK3R2O00459 728 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 STAU1O95793 577 aaKnown RBP17.65■□□□□ 0.42
USHBP1-203ENST00000431146 CYP3A5P20815 502 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 OAS2P29728 719 aaKnown RBP17.65■□□□□ 0.42
USHBP1-203ENST00000431146 SOX4Q06945 474 aaPredicted RBP17.65■□□□□ 0.42
USHBP1-203ENST00000431146 CCDC26Q8TAB7 109 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.65■□□□□ 0.42
USHBP1-203ENST00000431146 DDX27Q96GQ7 796 aaKnown RBP17.65■□□□□ 0.42
USHBP1-203ENST00000431146 HERPUD2Q9BSE4 406 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 UBXN6Q9BZV1 441 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 LHX5Q9H2C1 402 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 KLHL11Q9NVR0 708 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 NME7Q9Y5B8 376 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 F8VP50 259 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 M0QZ92 97 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 POLR3GO15318 223 aaPredicted RBP17.65■□□□□ 0.42
USHBP1-203ENST00000431146 TRPA1O75762 1119 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 CHRNA1P02708 482 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 ERBB2P04626 1255 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 PAK2Q13177 524 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 HLTFQ14527 1009 aaKnown RBP eCLIP17.65■□□□□ 0.42
USHBP1-203ENST00000431146 DEFB115Q30KQ5 88 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 SGO2Q562F6 1265 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 TTC27Q6P3X3 843 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 MAATS1Q7Z4T9 603 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 ZFP42Q96MM3 310 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 LPIN3Q9BQK8 851 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 NT5C1AQ9BXI3 368 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 DPH5Q9H2P9 285 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 SYNCQ9H7C4 482 aa17.65■□□□□ 0.42
USHBP1-203ENST00000431146 DAPK3O43293 454 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 RARAP10276 462 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 DR1Q01658 176 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 SIX1Q15475 284 aaPredicted RBP17.64■□□□□ 0.41
USHBP1-203ENST00000431146 ATP13A4Q4VNC1 1196 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 PPP1R15BQ5SWA1 713 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 ACOT1Q86TX2 421 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 CCDC50Q8IVM0 306 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 TSEN2Q8NCE0 465 aaKnown RBP17.64■□□□□ 0.41
USHBP1-203ENST00000431146 C3orf20Q8ND61 904 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 CD99L2Q8TCZ2 262 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 MAGOHBQ96A72 148 aaKnown RBP17.64■□□□□ 0.41
USHBP1-203ENST00000431146 IP6K2Q9UHH9 426 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 UBQLN1Q9UMX0 589 aaKnown RBP17.64■□□□□ 0.41
USHBP1-203ENST00000431146 ST3GAL5Q9UNP4 418 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 TRPV2Q9Y5S1 764 aa17.64■□□□□ 0.41
USHBP1-203ENST00000431146 SPTLC1O15269 473 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 PHF2O75151 1096 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 RPS6KA5O75582 802 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 VDRP11473 427 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 PSMC1P62191 440 aaKnown RBP17.63■□□□□ 0.41
USHBP1-203ENST00000431146 FAM193AP78312 1265 aa17.63■□□□□ 0.41
USHBP1-203ENST00000431146 JOSD2Q8TAC2 188 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms