RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 KAT5Q92993 513 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 KREMEN1Q96MU8 473 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 ACBD6Q9BR61 282 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 NAA15Q9BXJ9 866 aaKnown RBP11.74□□□□□ -0.53
CHD4-202ENST00000430771 STK33Q9BYT3 514 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 EDEM3Q9BZQ6 932 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 TTYH3Q9C0H2 523 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 NLRC4Q9NPP4 1024 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 FNIP2Q9P278 1114 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 CDH9Q9ULB4 789 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
CHD4-202ENST00000430771 LAMA3Q16787 3333 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 EPOPA6NHQ4 379 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 SOX1O00570 391 aaPredicted RBP11.73□□□□□ -0.53
CHD4-202ENST00000430771 EPHB6O15197 1021 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 AP5Z1O43299 807 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 ATP8B3O60423 1300 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 NOL4O94818 638 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 ADCY5O95622 1261 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 PAEPP09466 180 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 CCDC172P0C7W6 258 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 STAT1P42224 750 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 NDST1P52848 882 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 CDH8P55286 799 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 SMARCB1Q12824 385 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 DRAP1Q14919 205 aaPredicted RBP11.73□□□□□ -0.53
CHD4-202ENST00000430771 PTPN21Q16825 1174 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 DPY19L2P1Q6NXN4 242 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 TAS1R1Q7RTX1 841 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 RBBP8NLQ8NC74 664 aaPredicted RBP11.73□□□□□ -0.53
CHD4-202ENST00000430771 ZNF397Q8NF99 534 aaPredicted RBP11.73□□□□□ -0.53
CHD4-202ENST00000430771 OR10T2Q8NGX3 314 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 MRPL38Q96DV4 380 aaKnown RBP11.73□□□□□ -0.53
CHD4-202ENST00000430771 NUCKS1Q9H1E3 243 aaKnown RBP11.73□□□□□ -0.53
CHD4-202ENST00000430771 RXFP1Q9HBX9 757 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 HMGXB4Q9UGU5 601 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 AJAP1Q9UKB5 411 aaPredicted RBP11.73□□□□□ -0.53
CHD4-202ENST00000430771 CDY1Q9Y6F8 540 aa11.73□□□□□ -0.53
CHD4-202ENST00000430771 C2orf71A6NGG8 1288 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 CXCL14O95715 111 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 ACO1P21399 889 aaKnown RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 ACAT1P24752 427 aaKnown RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 DNAJB1P25685 340 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 SOX5P35711 763 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 USP8P40818 1118 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 PDE6CP51160 858 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 ZNF132P52740 706 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 JAM2P57087 298 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 ERVFC1P60507 584 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 PSMC1P62191 440 aaKnown RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 ROR1Q01973 937 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 NFE2Q16621 373 aaPredicted RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 HABP4Q5JVS0 413 aaKnown RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 SLC8B1Q6J4K2 584 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 ELMSAN1Q6PJG2 1045 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 C4orf50Q6ZRC1 276 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 CNGA4Q8IV77 575 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 DRC7Q8IY82 874 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 B3GALNT2Q8NCR0 500 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 C2orf15Q8WU43 125 aaKnown RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 AUTS2Q8WXX7 1259 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 TMEM176AQ96HP8 235 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 LRCH3Q96II8 777 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 GAS2L1Q99501 681 aaPredicted RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 RTP3Q9BQQ7 232 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 ZCWPW1Q9H0M4 648 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 TTYH1Q9H313 450 aaPredicted RBP11.72□□□□□ -0.53
CHD4-202ENST00000430771 LMCD1Q9NZU5 365 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 CNTN6Q9UQ52 1028 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 PTPRDP23468 1912 aa11.72□□□□□ -0.53
CHD4-202ENST00000430771 LRRC53A6NM62 1247 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 TEX28O15482 410 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 TBC1D4O60343 1298 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 LILRB3O75022 631 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 GLUD1P00367 558 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 GYPCP04921 128 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 PDGFRBP09619 1106 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 CD19P15391 556 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 FERP16591 822 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 LMO2P25791 158 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 GNA15P30679 374 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 IRS1P35568 1242 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 RAD23BP54727 409 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 ARPP19P56211 112 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 BPIFB4P59827 614 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 ZBED6P86452 979 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 PTK2Q05397 1052 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 CAMK1Q14012 370 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 STILQ15468 1287 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 ZNF394Q53GI3 561 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 SGO2Q562F6 1265 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 TPGS2Q68CL5 300 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 ACOT1Q86TX2 421 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 SPATA2LQ8IUW3 424 aaPredicted RBP11.71□□□□□ -0.53
CHD4-202ENST00000430771 FAM71AQ8IYT1 594 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 MRPL43Q8N983 215 aaKnown RBP11.71□□□□□ -0.53
CHD4-202ENST00000430771 WHAMMQ8TF30 809 aa11.71□□□□□ -0.53
CHD4-202ENST00000430771 MYLPFQ96A32 169 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms