RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 WDR44Q5JSH3 913 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 CYP26C1Q6V0L0 522 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 RNF19BQ6ZMZ0 732 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 TCEAL8Q8IYN2 117 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 ELMO3Q96BJ8 720 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 BCO2Q9BYV7 579 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 SNX25Q9H3E2 840 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 CYP3A43Q9HB55 503 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 CDH9Q9ULB4 789 aa21.48■■□□□ 1.03
CSNK1E-207ENST00000430335 SPDYE4A6NLX3 237 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 MBTPS2O43462 519 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 LRRN2O75325 713 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 POU2F2P09086 479 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 HNRNPA1P09651 372 aaKnown RBP eCLIP21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 EEF1GP26641 437 aaKnown RBP21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 ADCY1Q08828 1119 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 CLUL1Q15846 466 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 INTS6LQ5JSJ4 861 aaKnown RBP21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 CDKAL1Q5VV42 579 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 LRRTM3Q86VH5 581 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 CREBRFQ8IUR6 639 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 C12orf76Q8N812 135 aaPredicted RBP21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 OR6B3Q8NGW1 331 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 C2orf15Q8WU43 125 aaKnown RBP21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 ASB2Q96Q27 587 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 PKMYT1Q99640 499 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 HSFX1Q9UBD0 423 aa21.47■■□□□ 1.03
CSNK1E-207ENST00000430335 CCDC195A0A1B0GUA6 201 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 MTMR11A4FU01 709 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 KCNJ18B7U540 433 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 RFPL2O75678 378 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 SEC24AO95486 1093 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 VNN2O95498 520 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 ACAT1P24752 427 aaKnown RBP21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 LMO2P25791 158 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 CDH8P55286 799 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 KCNJ12Q14500 433 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 NFE2Q16621 373 aaPredicted RBP21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 MAN2A1Q16706 1144 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 ZSCAN23Q3MJ62 389 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 SLC39A12Q504Y0 691 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 TCP11X2Q5H9J9 407 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 PPM1LQ5SGD2 360 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 RARS2Q5T160 578 aaKnown RBP21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 CES5AQ6NT32 575 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 SCARA5Q6ZMJ2 495 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 GPR149Q86SP6 731 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 SLC7A14Q8TBB6 771 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 SUSD6Q92537 303 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 SYT15Q9BQS2 421 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 PRKD2Q9BZL6 878 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 SDCBP2Q9H190 292 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 FAM124BQ9H5Z6 455 aaPredicted RBP21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 CYP4F11Q9HBI6 524 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.46■■□□□ 1.031e-6■■■■■ 97
CSNK1E-207ENST00000430335 FAM50BQ9Y247 325 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 NME7Q9Y5B8 376 aa21.46■■□□□ 1.03
CSNK1E-207ENST00000430335 MTCL1Q9Y4B5 1905 aaKnown RBP21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 GRXCR2A6NFK2 248 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 PRRG1O14668 218 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 HCRTO43612 131 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 PRKCSHP14314 528 aaPredicted RBP21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 RAP1GAPP47736 663 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 NCAPHQ15003 741 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 PTCRAQ6ISU1 281 aaPredicted RBP21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 FAM171BQ6P995 826 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 TMC5Q6UXY8 1006 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 LMO3Q8TAP4 145 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 SPPL2BQ8TCT7 592 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 PGLYRP2Q96PD5 576 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 TUBGCP2Q9BSJ2 902 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 FANCLQ9NW38 375 aa21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 USP15Q9Y4E8 981 aaPredicted RBP21.45■■□□□ 1.02
CSNK1E-207ENST00000430335 GTPBP10A4D1E9 387 aaKnown RBP21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 A8MXQ7 604 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 PDGFRBP09619 1106 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 INCA1Q0VD86 236 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 DUSP4Q13115 394 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 MAPRE1Q15691 268 aaKnown RBP21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 SMAD2Q15796 467 aaKnown RBP21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 HSP90AA4PQ58FG1 418 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 UNC93AQ86WB7 457 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 TTC39CQ8N584 583 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 ATAD1Q8NBU5 361 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 EHBP1Q8NDI1 1231 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 TATDN2Q93075 761 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 ZNF707Q96C28 371 aaPredicted RBP21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 RIPOR3Q96MK2 946 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 APOL5Q9BWW9 433 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 TMLHEQ9NVH6 421 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 INSL5Q9Y5Q6 135 aa21.44■■□□□ 1.02
CSNK1E-207ENST00000430335 MYBPHLA2RUH7 354 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 SMTNL1A8MU46 457 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 WEE2P0C1S8 567 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 MTHFRP42898 656 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 ZNF165P49910 485 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 KCNQ1P51787 676 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 VWA3BQ502W6 1294 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 MIIPQ5JXC2 388 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms