RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 USP49Q70CQ1 688 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 SV2BQ7L1I2 683 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 EFCAB13Q8IY85 973 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 SPEM1Q8N4L4 309 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 BPIFB1Q8TDL5 484 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 ACCSQ96QU6 501 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 LPIN3Q9BQK8 851 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 GMEB2Q9UKD1 530 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 RAB23Q9ULC3 237 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 CLIC4Q9Y696 253 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 OBSL1O75147 1896 aa16.07■□□□□ 0.16
MSH5-208ENST00000429846 MYBPHLA2RUH7 354 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 SLC38A8A6NNN8 435 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 SPECC1L-ADORA2AF8WAN1 911 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 CTHP32929 405 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 CXCL12P48061 93 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 WSCD1Q658N2 575 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 CCDC73Q6ZRK6 1079 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 BRSK2Q8IWQ3 736 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 LEO1Q8WVC0 666 aaPredicted RBP16.06■□□□□ 0.16
MSH5-208ENST00000429846 DNAJC19Q96DA6 116 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 PCDHB13Q9Y5F0 798 aa16.06■□□□□ 0.16
MSH5-208ENST00000429846 ZNF638Q14966 1978 aaKnown RBP16.06■□□□□ 0.16
MSH5-208ENST00000429846 FRYLO94915 3013 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 MYMKA6NI61 221 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 SOBPA7XYQ1 873 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 PRR5-ARHGAP8B1AHC4 643 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 GCNT3O95395 438 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 PRAMEF12O95522 483 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 HAPLN1P10915 354 aaPredicted RBP16.05■□□□□ 0.16
MSH5-208ENST00000429846 GARTP22102 1010 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 DDX6P26196 483 aaKnown RBP eCLIP16.05■□□□□ 0.16
MSH5-208ENST00000429846 ARHGAP8P85298 464 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 TSPY1Q01534 308 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 LMNB2Q03252 620 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 RESTQ13127 1097 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
MSH5-208ENST00000429846 SYNPOQ8N3V7 929 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 CELF5Q8N6W0 485 aaKnown RBP16.05■□□□□ 0.16
MSH5-208ENST00000429846 SPATA18Q8TC71 538 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 CACTINQ8WUQ7 758 aaKnown RBP16.05■□□□□ 0.16
MSH5-208ENST00000429846 FAM213AQ9BRX8 229 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 IL21Q9HBE4 155 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 THG1LQ9NWX6 298 aaKnown RBP16.05■□□□□ 0.16
MSH5-208ENST00000429846 ABI2Q9NYB9 513 aaPredicted RBP16.05■□□□□ 0.16
MSH5-208ENST00000429846 PCDHB5Q9Y5E4 795 aa16.05■□□□□ 0.16
MSH5-208ENST00000429846 FRMD3A2A2Y4 597 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 CNR2P34972 360 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 AVPR1AP37288 418 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 STAT6P42226 847 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 SOX9P48436 509 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 CYP4F8P98187 520 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 TFAMQ00059 246 aaKnown RBP16.04■□□□□ 0.16
MSH5-208ENST00000429846 KCNA1Q09470 495 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 LAIR1Q6GTX8 287 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 LRRTM3Q86VH5 581 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 CMTM8Q8IZV2 173 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 TMEM86AQ8N2M4 240 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 LRRC52Q8N7C0 313 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 IKZF4Q9H2S9 585 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 TMEM206Q9H813 350 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 KIF9Q9HAQ2 790 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 ABCB6Q9NP58 842 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 RBAKQ9NYW8 714 aaPredicted RBP16.04■□□□□ 0.16
MSH5-208ENST00000429846 GTSE1Q9NYZ3 720 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 ITGA11Q9UKX5 1188 aa16.04■□□□□ 0.16
MSH5-208ENST00000429846 KIAA0391O15091 583 aaKnown RBP16.03■□□□□ 0.16
MSH5-208ENST00000429846 HUS1O60921 280 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 LRP3O75074 770 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 ITGB3P05106 788 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 CSH1P0DML2 217 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 CSH2P0DML3 217 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 IDEP14735 1019 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 SYT1P21579 422 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 POLR2BP30876 1174 aaKnown RBP16.03■□□□□ 0.16
MSH5-208ENST00000429846 SATB1Q01826 763 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 CCINQ13939 588 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 GAS6Q14393 721 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 RSPO4Q2I0M5 234 aaPredicted RBP16.03■□□□□ 0.16
MSH5-208ENST00000429846 ITPRIPL2Q3MIP1 535 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 TXNDC11Q6PKC3 985 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 SYCP3Q8IZU3 236 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 C1orf127Q8N9H9 656 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 SAAL1Q96ER3 474 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 INTS4Q96HW7 963 aaKnown RBP16.03■□□□□ 0.16
MSH5-208ENST00000429846 ZFYVE19Q96K21 471 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 CLIC6Q96NY7 704 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 ACBD6Q9BR61 282 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 TBC1D7Q9P0N9 293 aa16.03■□□□□ 0.16
MSH5-208ENST00000429846 UXTQ9UBK9 157 aaPredicted RBP16.03■□□□□ 0.16
MSH5-208ENST00000429846 EXTL3O43909 919 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 HOXA6P31267 233 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 CASP5P51878 434 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 NLRP12P59046 1061 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 RPL10AP62906 217 aaKnown RBP16.02■□□□□ 0.16
MSH5-208ENST00000429846 MYL7Q01449 175 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 SLC39A14Q15043 492 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 STXBP4Q6ZWJ1 553 aa16.02■□□□□ 0.16
MSH5-208ENST00000429846 PDCL2Q8N4E4 241 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms