RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 P4HA1P13674 534 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 TNNT1P13805 278 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 CCDC130P13994 396 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 SYN1P17600 705 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 ANXA13P27216 316 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 TKTP29401 623 aaKnown RBP9.45□□□□□ -0.9
SMC6-204ENST00000428868 RFC2P35250 354 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 PNPLA4P41247 253 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 OR1G1P47890 313 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 SLC11A1P49279 550 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 BCAR1P56945 870 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 WDR5P61964 334 aaKnown RBP9.45□□□□□ -0.9
SMC6-204ENST00000428868 YWHAEP62258 255 aaKnown RBP9.45□□□□□ -0.9
SMC6-204ENST00000428868 PTPN14Q15678 1187 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 ARHGAP29Q52LW3 1261 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 SYT10Q6XYQ8 523 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 DPH6Q7L8W6 267 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 VPS36Q86VN1 386 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 TMEM173Q86WV6 379 aaPredicted RBP9.45□□□□□ -0.9
SMC6-204ENST00000428868 FMNL3Q8IVF7 1028 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 WDTC1Q8N5D0 677 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 C1orf131Q8NDD1 294 aaKnown RBP9.45□□□□□ -0.9
SMC6-204ENST00000428868 OR6B3Q8NGW1 331 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 URGCPQ8TCY9 931 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 BADQ92934 168 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 FAXDC2Q96IV6 333 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 RTP3Q9BQQ7 232 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 THAP2Q9H0W7 228 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 MARCH5Q9NX47 278 aa9.45□□□□□ -0.9
SMC6-204ENST00000428868 ANAPC1Q9H1A4 1944 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 A8MXQ7 604 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 NT5C1B-RDH14C9J2C7 533 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 TULP2O00295 520 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 O00370 1275 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 CCP110O43303 1012 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 HUS1O60921 280 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 RTN2O75298 545 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 B3GAT3O94766 335 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 IPO7O95373 1038 aaKnown RBP9.44□□□□□ -0.9
SMC6-204ENST00000428868 GJB6O95452 261 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 PFKMP08237 780 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 PAEPP09466 180 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 H2AFZP0C0S5 128 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 WARSP23381 471 aaKnown RBP9.44□□□□□ -0.9
SMC6-204ENST00000428868 RPL9P32969 192 aaKnown RBP9.44□□□□□ -0.9
SMC6-204ENST00000428868 RABGGTBP53611 331 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 BPIFB4P59827 614 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 CENPCQ03188 943 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 PTP4A2Q12974 167 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 IKBKEQ14164 716 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 GOLGA7BQ2TAP0 167 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 ZNF569Q5MCW4 686 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 PPP1R26Q5T8A7 1209 aaPredicted RBP9.44□□□□□ -0.9
SMC6-204ENST00000428868 ACAD10Q6JQN1 1059 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 DSTYKQ6XUX3 929 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 ZNF662Q6ZS27 426 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 H2AFVQ71UI9 128 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 MON1BQ7L1V2 547 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 OTOP2Q7RTS6 562 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 TTC30AQ86WT1 665 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 ZNF677Q86XU0 584 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 CPNE8Q86YQ8 564 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 APPL2Q8NEU8 664 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 UBA3Q8TBC4 463 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 RSPH1Q8WYR4 309 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 B3GALT6Q96L58 329 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 TMEM209Q96SK2 561 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 C11orf70Q9BRQ4 267 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 NT5C1AQ9BXI3 368 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 GOLPH3Q9H4A6 298 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 CWH43Q9H720 699 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 RC3H2Q9HBD1 1191 aaKnown RBP9.44□□□□□ -0.9
SMC6-204ENST00000428868 OSGEPQ9NPF4 335 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 IL23AQ9NPF7 189 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 ZMYND8Q9ULU4 1186 aaPredicted RBP9.44□□□□□ -0.9
SMC6-204ENST00000428868 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.44□□□□□ -0.9
SMC6-204ENST00000428868 COG5Q9UP83 839 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 COLQQ9Y215 455 aaPredicted RBP9.44□□□□□ -0.9
SMC6-204ENST00000428868 ATP8B3O60423 1300 aa9.44□□□□□ -0.9
SMC6-204ENST00000428868 COL4A4P53420 1690 aaPredicted RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 GOLGA6L9A6NEM1 432 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 M0QYV0 167 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 M0QZQ0 153 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 GABRDO14764 452 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 NRP1O14786 923 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 DGKIO75912 1065 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 TMEM253P0C7T8 217 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 VDRP11473 427 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 GZMAP12544 262 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 ADORA2BP29275 332 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 GNL1P36915 607 aaPredicted RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 GNG11P61952 73 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 ETF1P62495 437 aaKnown RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 RNASELQ05823 741 aaKnown RBP9.43□□□□□ -0.9
SMC6-204ENST00000428868 KIF5AQ12840 1032 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 PTPROQ16827 1216 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 PTPN20Q4JDL3 420 aa9.43□□□□□ -0.9
SMC6-204ENST00000428868 SGO2Q562F6 1265 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms