RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 OR10T2Q8NGX3 314 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 PGBD4Q96DM1 585 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 PIWIL1Q96J94 861 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 BTBD6Q96KE9 485 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 HEXIM2Q96MH2 286 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 FAM193BQ96PV7 902 aaPredicted RBP10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 ZBED2Q9BTP6 218 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 NUP58Q9BVL2 599 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 TRAIPQ9BWF2 469 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 CWH43Q9H720 699 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 ALG13Q9NP73 1137 aaKnown RBP10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 SQORQ9Y6N5 450 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 DMDP11532 3685 aa10.15□□□□□ -0.78
HMGCLL1-206ENST00000428842 MACROD2A1Z1Q3 448 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 A8MXQ7 604 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 H0YGN5 161 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 P4HA2O15460 535 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 BUB1O43683 1085 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 EOMESO95936 686 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 SPATA31D3P0C874 917 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 DNA2P51530 1060 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 GCNT1Q02742 428 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 DSC1Q08554 894 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 BTG3Q14201 252 aaPredicted RBP10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 ASTE1Q2TB18 679 aaPredicted RBP10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 CYP4A22Q5TCH4 519 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 DENND1BQ6P3S1 775 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 SPATA31D4Q6ZUB0 917 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 NPAS4Q8IUM7 802 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 ADGRF2Q8IZF7 708 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 BCO2Q9BYV7 579 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 AIPL1Q9NZN9 384 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 EPN1Q9Y6I3 576 aaPredicted RBP10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 FRYLO94915 3013 aa10.15□□□□□ -0.79
HMGCLL1-206ENST00000428842 CILPO75339 1184 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 GALTP07902 379 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 MYO1EQ12965 1108 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 GRIK3Q13003 919 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 SURF1Q15526 300 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 FAM171A1Q5VUB5 890 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 NAA35Q5VZE5 725 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 CYP26C1Q6V0L0 522 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 WDTC1Q8N5D0 677 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 UBR7Q8N806 425 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 C1orf131Q8NDD1 294 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 ZNF606Q8WXB4 792 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 ARHGEF26Q96DR7 871 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 KCNK16Q96T55 309 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 ADGRG1Q9Y653 693 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 TADA2AO75478 443 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 GNL1P36915 607 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 IFRD2Q12894 506 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 TSR1Q2NL82 804 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 MDH1BQ5I0G3 518 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 APBB1IPQ7Z5R6 666 aaPredicted RBP10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 APPL2Q8NEU8 664 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 CLEC4CQ8WTT0 213 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 RSPH1Q8WYR4 309 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 C17orf80Q9BSJ5 609 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 SYT11Q9BT88 431 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 B3GNT5Q9BYG0 378 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 OSGEPQ9NPF4 335 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 CRTAC1Q9NQ79 661 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 DDX43Q9NXZ2 648 aaKnown RBP10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 MYO1AQ9UBC5 1043 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 GUCA1BQ9UMX6 200 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 PPP2R2CQ9Y2T4 447 aa10.14□□□□□ -0.79
HMGCLL1-206ENST00000428842 KIAA1671Q9BY89 1806 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 RFXAPO00287 272 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 PMM2O15305 246 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 HUS1O60921 280 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 TUBB4AP04350 444 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 SERPING1P05155 500 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 LRPAP1P30533 357 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 GPR15P49685 360 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 TRIM14Q14142 442 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 LLGL1Q15334 1064 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 TAF5Q15542 800 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 RAB6CQ53S08 254 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 CCDC122Q5T0U0 273 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 FAM182AQ5T1J6 154 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 KIF18AQ8NI77 898 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 SLC2A14Q8TDB8 520 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 PPP1R13BQ96KQ4 1090 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 AGPAT1Q99943 283 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 RAB6CQ9H0N0 254 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 THAP2Q9H0W7 228 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 ZNHIT6Q9NWK9 470 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 GRAP2O75791 330 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 GABBR2O75899 941 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 GJB5O95377 273 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 RPLP2P05387 115 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 ATP2A2P16615 1042 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 HNRNPH3P31942 346 aaKnown RBP10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 TTC30AQ86WT1 665 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 CD302Q8IX05 232 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 REXO1L1PQ8IX06 675 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 URGCPQ8TCY9 931 aa10.13□□□□□ -0.79
HMGCLL1-206ENST00000428842 ZNF592Q92610 1267 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms