RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 ARHGAP15Q53QZ3 475 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 CRELD2Q6UXH1 353 aaPredicted RBP17.89■□□□□ 0.45
VARS-216ENST00000428445 DYMQ7RTS9 669 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 ITIH5Q86UX2 942 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 RALGPS2Q86X27 583 aaPredicted RBP17.89■□□□□ 0.45
VARS-216ENST00000428445 EFCAB13Q8IY85 973 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 RASSF8Q8NHQ8 419 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 AK8Q96MA6 479 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 IER2Q9BTL4 223 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 SEMA4GQ9NTN9 838 aa17.89■□□□□ 0.45
VARS-216ENST00000428445 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.45
VARS-216ENST00000428445 AGO2Q9UKV8 859 aaKnown RBP17.89■□□□□ 0.45
VARS-216ENST00000428445 TBCAO75347 108 aaKnown RBP17.88■□□□□ 0.45
VARS-216ENST00000428445 RETP07949 1114 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 TUFMP49411 452 aaKnown RBP17.88■□□□□ 0.45
VARS-216ENST00000428445 KCNA1Q09470 495 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 CCINQ13939 588 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 SF3A1Q15459 793 aaKnown RBP17.88■□□□□ 0.45
VARS-216ENST00000428445 TMEM150AQ86TG1 271 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 LONP2Q86WA8 852 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 METTL23Q86XA0 190 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 CD302Q8IX05 232 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 MAB21L3Q8N8X9 362 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 RIN3Q8TB24 985 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 CHFRQ96EP1 664 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 EPSTI1Q96J88 318 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 TSPAN18Q96SJ8 248 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 RTKNQ9BST9 563 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 TBC1D7Q9P0N9 293 aa17.88■□□□□ 0.45
VARS-216ENST00000428445 TPRP12270 2363 aaKnown RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 AXIN1O15169 862 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 HAPLN1P10915 354 aaPredicted RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 SDHBP21912 280 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 ADSSP30520 456 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 TAF6P49848 677 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 TAF12Q16514 161 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 DGKKQ5KSL6 1271 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 LARP1BQ659C4 914 aaKnown RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 NAIF1Q69YI7 327 aaPredicted RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 SFR1Q86XK3 245 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 THEM5Q8N1Q8 247 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 FAM160A2Q8N612 972 aaPredicted RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 PI4K2AQ9BTU6 479 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 EBF3Q9H4W6 596 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 FBRSL1Q9HCM7 1045 aaKnown RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 HPS4Q9NQG7 708 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 MAGED2Q9UNF1 606 aaPredicted RBP17.87■□□□□ 0.45
VARS-216ENST00000428445 SMC3Q9UQE7 1217 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 DERAQ9Y315 318 aa17.87■□□□□ 0.45
VARS-216ENST00000428445 OBSL1O75147 1896 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 HCRTO43612 131 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 F11P03951 625 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 ARSAP15289 507 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 HMGA1P17096 107 aaKnown RBP17.86■□□□□ 0.45
VARS-216ENST00000428445 DDIT3P35638 169 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 VEPH1Q14D04 833 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 CCDC142Q17RM4 750 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 ITPRIPL2Q3MIP1 535 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 TXNDC8Q6A555 127 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 PRR23CQ6ZRP0 262 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 CEP68Q76N32 757 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 ZNF720Q7Z2F6 126 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 CMTM8Q8IZV2 173 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 POMGNT1Q8WZA1 660 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 LARP4BQ92615 738 aaKnown RBP17.86■□□□□ 0.45
VARS-216ENST00000428445 MSANTD3Q96H12 275 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 ASB7Q9H672 318 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 OBP2AQ9NY56 170 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 HSFX1Q9UBD0 423 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 CLIC4Q9Y696 253 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 STYXL1Q9Y6J8 313 aa17.86■□□□□ 0.45
VARS-216ENST00000428445 KPNA7A9QM74 516 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 PAPSS2O95340 614 aaPredicted RBP17.85■□□□□ 0.45
VARS-216ENST00000428445 FGF19O95750 216 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 KCNA4P22459 653 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 ACAT1P24752 427 aaKnown RBP17.85■□□□□ 0.45
VARS-216ENST00000428445 CDC25CP30307 473 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 ABCD1P33897 745 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 LONP1P36776 959 aaKnown RBP17.85■□□□□ 0.45
VARS-216ENST00000428445 MCM2P49736 904 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 NLRP12P59046 1061 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 FSTL4Q6MZW2 842 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 TTC16Q8NEE8 873 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 USP13Q92995 863 aaPredicted RBP17.85■□□□□ 0.45
VARS-216ENST00000428445 SAAL1Q96ER3 474 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 GCNAQ96QF7 691 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 FAM83CQ9BQN1 747 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 DSEQ9UL01 958 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 C2CD2Q9Y426 696 aa17.85■□□□□ 0.45
VARS-216ENST00000428445 EML5Q05BV3 1969 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 GOLGA8IPA6NC78 632 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 MYMKA6NI61 221 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 GOLGA8JA6NMD2 632 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 SLC30A4O14863 429 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 PRPF40AO75400 957 aaKnown RBP17.84■□□□□ 0.45
VARS-216ENST00000428445 EGFP01133 1207 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 PAX3P23760 479 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 WEE1P30291 646 aa17.84■□□□□ 0.45
VARS-216ENST00000428445 RUNX3Q13761 415 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms