RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 IRF5Q13568 498 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 MFSD10Q14728 455 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 PTPN20Q4JDL3 420 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 PPP1R15BQ5SWA1 713 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 ZDHHC24Q6UX98 284 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 APBB1IPQ7Z5R6 666 aaPredicted RBP18.28■□□□□ 0.52
PRDM5-203ENST00000428209 ATG4AQ8WYN0 398 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 OSBPL8Q9BZF1 889 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 PARP2Q9UGN5 583 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 SMIM35A0A1B0GVV1 85 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 GOLGA6L10A6NI86 522 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 F8VP50 259 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 SLC27A1Q6PCB7 646 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 OR2W6PQ8NHA6 318 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 RNF25Q96BH1 459 aaPredicted RBP18.28■□□□□ 0.52
PRDM5-203ENST00000428209 SNTG2Q9NY99 539 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 CYTH4Q9UIA0 394 aa18.28■□□□□ 0.52
PRDM5-203ENST00000428209 MBLAC1A4D2B0 266 aaPredicted RBP18.27■□□□□ 0.52
PRDM5-203ENST00000428209 H0YGN5 161 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 GOLGA8SH3BPF8 625 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 PPFIA2O75334 1257 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 TCF4P15884 667 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 CETN2P41208 172 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 OGDHQ02218 1023 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 PIGHQ14442 188 aaPredicted RBP18.27■□□□□ 0.52
PRDM5-203ENST00000428209 ATP13A4Q4VNC1 1196 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 RUFY4Q6ZNE9 571 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 SLCO2A1Q92959 643 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 HEXIM2Q96MH2 286 aaKnown RBP18.27■□□□□ 0.52
PRDM5-203ENST00000428209 SYNCQ9H7C4 482 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 NFS1Q9Y697 457 aa18.27■□□□□ 0.52
PRDM5-203ENST00000428209 CPT1AP50416 773 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 KRT17Q04695 432 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 KLF1Q13351 362 aaPredicted RBP18.27■□□□□ 0.51
PRDM5-203ENST00000428209 NOTUMQ6P988 496 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 DPH6Q7L8W6 267 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 DNAJB3Q8WWF6 145 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 EIF2AQ9BY44 585 aaKnown RBP18.27■□□□□ 0.51
PRDM5-203ENST00000428209 DCLK3Q9C098 648 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 PLEKHA5Q9HAU0 1116 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 KLHL11Q9NVR0 708 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 TJP2Q9UDY2 1190 aa18.27■□□□□ 0.51
PRDM5-203ENST00000428209 MTRF1LQ9UGC7 380 aaKnown RBP18.27■□□□□ 0.51
PRDM5-203ENST00000428209 R3HDM2Q9Y2K5 976 aaKnown RBP18.27■□□□□ 0.51
PRDM5-203ENST00000428209 MYL3P08590 195 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 KRT3P12035 628 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 DARSP14868 501 aaKnown RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 PSEN2P49810 448 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 PSMC1P62191 440 aaKnown RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 MYO1EQ12965 1108 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 DNAJC21Q5F1R6 531 aaKnown RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 C17orf99Q6UX52 265 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 RCOR2Q8IZ40 523 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 SH2D3CQ8N5H7 860 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 TXLNGYQ9BZA5 131 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 AP5M1Q9H0R1 490 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 CXCL16Q9H2A7 254 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 CENPHQ9H3R5 247 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 HOMER3Q9NSC5 361 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 FEZ2Q9UHY8 353 aaPredicted RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 BARX2Q9UMQ3 279 aaPredicted RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 MICAL2O94851 1124 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 MYZAPP0CAP1 466 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 VDRP11473 427 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 NDST1P52848 882 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 YARSP54577 528 aaKnown RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 BEX3Q00994 111 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 NFX1Q12986 1120 aaKnown RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 HIC1Q14526 733 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 ODF2Q5BJF6 829 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 GRK7Q8WTQ7 553 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 USP6NLQ92738 828 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 RBM41Q96IZ5 413 aaKnown RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 CPXM1Q96SM3 734 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 TRIM6Q9C030 488 aaPredicted RBP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.26■□□□□ 0.51
PRDM5-203ENST00000428209 HES2Q9Y543 173 aa18.26■□□□□ 0.51
PRDM5-203ENST00000428209 SIGLEC16A6NMB1 481 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 PI4K2BG5E9Z4 385 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 M0QYV0 167 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 STAU1O95793 577 aaKnown RBP18.25■□□□□ 0.51
PRDM5-203ENST00000428209 RFC1P35251 1148 aaPredicted RBP18.25■□□□□ 0.51
PRDM5-203ENST00000428209 RGS2P41220 211 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 ZNF844Q08AG5 666 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 CALCOCO2Q13137 446 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 CNGA2Q16280 664 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 SPDYCQ5MJ68 293 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 LRRC38Q5VT99 294 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 ANKS1BQ7Z6G8 1248 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 ATL2Q8NHH9 583 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 ATP6V1G3Q96LB4 118 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 CCDC114Q96M63 670 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 TMBIM4Q9HC24 238 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 TRIP11Q15643 1979 aa18.25■□□□□ 0.51
PRDM5-203ENST00000428209 TREHO43280 583 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 KRT1P04264 644 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 PMS2P54278 862 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 INCA1Q0VD86 236 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 PCBP1Q15365 356 aaKnown RBP eCLIP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms